RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 AGPAT4Q9NRZ5 378 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 KLHL21Q9UJP4 597 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 C1orf196B1AJZ1 125 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 RNH1P13489 461 aaKnown RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 INSRRP14616 1297 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 PRMT2P55345 433 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 DUOXA1Q1HG43 343 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 PTCHD3Q3KNS1 767 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 TSTD2Q5T7W7 516 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 ZDHHC24Q6UX98 284 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 KCTD4Q8WVF5 259 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 KCNJ9Q92806 393 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 HSPA12BQ96MM6 686 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 FANCMQ8IYD8 2048 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 LACTBL1A8MY62 500 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 IRAK2O43187 625 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 ATP6AP2O75787 350 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 SNTA1Q13424 505 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 MED27Q6P2C8 311 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 SLC22A16Q86VW1 577 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 ATAD1Q8NBU5 361 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 SLC37A3Q8NCC5 494 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 JPH3Q8WXH2 748 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 TESCQ96BS2 214 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 FUZQ9BT04 418 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 POLR3HQ9Y535 204 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 NPIPA7E9PJI5 369 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 NPIPA8P0DM63 369 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 EARS2Q5JPH6 523 aaKnown RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 METTL11BQ5VVY1 283 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 SCML4Q8N228 414 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 OR52K2Q8NGK3 314 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 ATXN3LQ9H3M9 355 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 CYB5R1Q9UHQ9 305 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 FKBP7Q9Y680 259 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 LAMB4A4D0S4 1761 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 PAK4O96013 591 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 BRAT1Q6PJG6 821 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 RASGEF1AQ8N9B8 481 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 TXLNGYQ9BZA5 131 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 TOR3AQ9H497 397 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 PNMA8BQ9ULN7 279 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 AXIN2Q9Y2T1 843 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 LRRC37A3O60309 1634 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 NCOR2Q9Y618 2525 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 CDH13P55290 713 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 GAD2Q05329 585 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 RTL6Q6ICC9 239 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 SNX20Q7Z614 316 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 PIGZQ86VD9 579 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 TXNDC5Q8NBS9 432 aaKnown RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF431Q8TF32 576 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 TCTEX1D2Q8WW35 142 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 POP1Q99575 1024 aaKnown RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 HEBP1Q9NRV9 189 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 RECQL4O94761 1208 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 CYB5AP00167 134 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 OAS1P00973 400 aaKnown RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 RB1P06400 928 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 ENTPD1P49961 510 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 ZSWIM9Q86XI8 627 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 DPYSL5Q9BPU6 564 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 BCL9O00512 1426 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 DOCK3Q8IZD9 2030 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 S100A8P05109 93 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 GJA9P57773 515 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 SCAPQ12770 1279 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 NFATC3Q12968 1075 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 FAM182AQ5T1J6 154 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 Q8N402 240 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF527Q8NB42 609 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF285Q96NJ3 590 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 IPPKQ9H8X2 491 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 SDR39U1Q9NRG7 319 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS13B-202ENST00000357162 TNFRSF10DQ9UBN6 386 aa6.42□□□□□ -1.38
VPS13B-202ENST00000357162 INMT-MINDY4F8WBC2 141 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 SLC16A5O15375 505 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 IFNA10P01566 189 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 IFNA4P05014 189 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 CDK2P24941 298 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 CDC25CP30307 473 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 PKLRP30613 574 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 OR3A3P47888 321 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 OR3A2P47893 321 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 FKBP1BP68106 108 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 EIF2S3LQ2VIR3 472 aaKnown RBP6.41□□□□□ -1.38
VPS13B-202ENST00000357162 TERB2Q8NHR7 220 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 S100PBPQ96BU1 408 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 LGALS12Q96DT0 336 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF436Q9C0F3 470 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-202ENST00000357162 P2RX2Q9UBL9 471 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 GTF2A1LQ9UNN4 478 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 UNCXA6NJT0 531 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 TTLL13PA6NNM8 815 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 H3BSA7 217 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 AOC2O75106 756 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 OR2B3O76000 313 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 MT-ND1P03886 318 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 FAM69AQ5T7M9 428 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms