RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 GSTO2Q9H4Y5 243 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 MVB12BQ9H7P6 319 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 AKIRIN1Q9H9L7 192 aaPredicted RBP3.88□□□□□ -1.79
LIG4-201ENST00000356922 FARSBQ9NSD9 589 aaKnown RBP3.88□□□□□ -1.79
LIG4-201ENST00000356922 STARD5Q9NSY2 213 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 KCNK4Q9NYG8 393 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 PCTPQ9UKL6 214 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 ZNF490Q9ULM2 529 aaPredicted RBP3.88□□□□□ -1.79
LIG4-201ENST00000356922 PCDHGB2Q9Y5G2 931 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 COLEC10Q9Y6Z7 277 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 CACNA1GO43497 2377 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 IGHV5-10-1A0A0J9YXX1 117 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 GSAPA4D1B5 854 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 SLC9B1P1A6NJY1 282 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 OR5K4A6NMS3 321 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 EIF3FO00303 357 aaPredicted RBP3.88□□□□□ -1.79
LIG4-201ENST00000356922 CCNT2O60583 730 aaKnown RBP3.88□□□□□ -1.79
LIG4-201ENST00000356922 GLRA3O75311 464 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 SH3BGRLO75368 114 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 KATNA1O75449 491 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 WFS1O76024 890 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 IPO13O94829 963 aaKnown RBP3.88□□□□□ -1.79
LIG4-201ENST00000356922 CATP04040 527 aaKnown RBP3.88□□□□□ -1.79
LIG4-201ENST00000356922 BPGMP07738 259 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 CCL4P13236 92 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 GFAPP14136 432 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 CD1EP15812 388 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 DPP6P42658 865 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 NEK2P51955 445 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 PRKAA2P54646 552 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 ERVPABLB-1P60509 514 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 SIM1P81133 766 aaPredicted RBP3.88□□□□□ -1.79
LIG4-201ENST00000356922 PLOD1Q02809 727 aaPredicted RBP3.88□□□□□ -1.79
LIG4-201ENST00000356922 GPS2Q13227 327 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 C16orf72Q14CZ0 275 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 SUZ12Q15022 739 aaKnown RBP3.88□□□□□ -1.79
LIG4-201ENST00000356922 SETDB1Q15047 1291 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 NR0B2Q15466 257 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 SF1Q15637 639 aaKnown RBP3.88□□□□□ -1.79
LIG4-201ENST00000356922 DEFB110Q30KQ9 67 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 IRGCQ6NXR0 463 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 LETMD1Q6P1Q0 360 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 ADAMTSL2Q86TH1 951 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 THOC6Q86W42 341 aaKnown RBP3.88□□□□□ -1.79
LIG4-201ENST00000356922 AVL9Q8NBF6 648 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 OR2L8Q8NGY9 312 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 AGR3Q8TD06 166 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 TRPC4APQ8TEL6 797 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 SH3KBP1Q96B97 665 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 FBXL8Q96CD0 374 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 FOPNLQ96NB1 174 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 SELENOSQ9BQE4 189 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 NOL11Q9H8H0 719 aaKnown RBP3.88□□□□□ -1.79
LIG4-201ENST00000356922 PPCSQ9HAB8 311 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 APMAPQ9HDC9 416 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 OCIAD1Q9NX40 245 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 MKS1Q9NXB0 559 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 RNF11Q9Y3C5 154 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 ACACAQ13085 2346 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 FER1L5A0AVI2 2057 aa3.88□□□□□ -1.79
LIG4-201ENST00000356922 KLHL33A6NCF5 533 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 ISM1B1AKI9 464 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 C4orf51C9J302 202 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 SLC16A5O15375 505 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 OPA1O60313 960 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 STK16O75716 305 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 DKK1O94907 266 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 WDR47O94967 919 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 TIAF1O95411 115 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 PROS1P07225 676 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 ALPPL2P10696 532 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 FOLR1P15328 257 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 IMPDH1P20839 514 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 MAP4P27816 1152 aaKnown RBP3.87□□□□□ -1.79
LIG4-201ENST00000356922 CAPZBP47756 277 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 PRDX1Q06830 199 aaKnown RBP3.87□□□□□ -1.79
LIG4-201ENST00000356922 ARL13AQ5H913 290 aaPredicted RBP3.87□□□□□ -1.79
LIG4-201ENST00000356922 SCIMPQ6UWF3 145 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 ZYG11AQ6WRX3 759 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 ZNF771Q7L3S4 317 aaPredicted RBP3.87□□□□□ -1.79
LIG4-201ENST00000356922 GOLGA7Q7Z5G4 137 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 VN1R5Q7Z5H4 357 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 SLITRK4Q8IW52 837 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 FBXO39Q8N4B4 442 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 TEX9Q8N6V9 391 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 CCNYL1Q8N7R7 359 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 SLC38A9Q8NBW4 561 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 OR2L3Q8NG85 312 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 NUDT8Q8WV74 236 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 AHCYL2Q96HN2 611 aaKnown RBP3.87□□□□□ -1.79
LIG4-201ENST00000356922 SORT1Q99523 831 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 DPH7Q9BTV6 452 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 LRRN3Q9H3W5 708 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 IRAK4Q9NWZ3 460 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 ACTR10Q9NZ32 417 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 OR6C2Q9NZP2 312 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 ZDHHC2Q9UIJ5 367 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 TIMM22Q9Y584 194 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 ACTL7BQ9Y614 415 aa3.87□□□□□ -1.79
LIG4-201ENST00000356922 COL5A1P20908 1838 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms