RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 SPEF1Q9Y4P9 236 aa18.39■□□□□ 0.53
PRPF39-201ENST00000355765 LOC285095A0A1B0GVY8 99 aa18.39■□□□□ 0.53
PRPF39-201ENST00000355765 KCNE1P15382 129 aa18.39■□□□□ 0.53
PRPF39-201ENST00000355765 ETV6P41212 452 aa18.39■□□□□ 0.53
PRPF39-201ENST00000355765 TGM4P49221 684 aa18.39■□□□□ 0.53
PRPF39-201ENST00000355765 FAM189BP81408 668 aa18.39■□□□□ 0.53
PRPF39-201ENST00000355765 GTF2H2Q13888 395 aa18.39■□□□□ 0.53
PRPF39-201ENST00000355765 ALFQ53S48 1182 aa18.39■□□□□ 0.53
PRPF39-201ENST00000355765 GTF2H2CQ6P1K8 395 aa18.39■□□□□ 0.53
PRPF39-201ENST00000355765 DNAJC22Q8N4W6 341 aa18.39■□□□□ 0.53
PRPF39-201ENST00000355765 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.39■□□□□ 0.53
PRPF39-201ENST00000355765 OR4K2Q8NGD2 314 aa18.39■□□□□ 0.53
PRPF39-201ENST00000355765 EXOSC4Q9NPD3 245 aaKnown RBP18.39■□□□□ 0.53
PRPF39-201ENST00000355765 PCDHB5Q9Y5E4 795 aa18.39■□□□□ 0.53
PRPF39-201ENST00000355765 TRBV5-3A0A0A0MS03 114 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 A0A1W2PQ09 198 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 IGLV3-25P01717 112 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 FOXD4Q12950 439 aaPredicted RBP18.38■□□□□ 0.53
PRPF39-201ENST00000355765 NFE2Q16621 373 aaPredicted RBP18.38■□□□□ 0.53
PRPF39-201ENST00000355765 TSTQ16762 297 aaKnown RBP18.38■□□□□ 0.53
PRPF39-201ENST00000355765 PTCHD3Q3KNS1 767 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 NLRP8Q86W28 1048 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 ANGPTL6Q8NI99 470 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 PPP3R2Q96LZ3 170 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 OR5M11Q96RB7 305 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 SMURF1Q9HCE7 757 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 SAMD4AQ9UPU9 718 aaKnown RBP18.38■□□□□ 0.53
PRPF39-201ENST00000355765 PTGESO14684 152 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 TEX28O15482 410 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 GPR32O75388 356 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 CNMDO75829 334 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 IL6P05231 212 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 GDF5P43026 501 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 HSPA7P48741 367 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 AFF1P51825 1210 aaKnown RBP18.38■□□□□ 0.53
PRPF39-201ENST00000355765 IL2P60568 153 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 MED22Q15528 200 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 GNASQ5JWF2 1037 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 PIK3R6Q5UE93 754 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 CACHD1Q5VU97 1274 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 CIR1Q86X95 450 aaPredicted RBP18.38■□□□□ 0.53
PRPF39-201ENST00000355765 PIANPQ8IYJ0 282 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 FAM109AQ8N4B1 249 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 COQ8BQ96D53 544 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 MCCC1Q96RQ3 725 aaPredicted RBP18.38■□□□□ 0.53
PRPF39-201ENST00000355765 PITX2Q99697 317 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 REEP1Q9H902 201 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 CCL27Q9Y4X3 112 aa18.38■□□□□ 0.53
PRPF39-201ENST00000355765 CLCA1A8K7I4 914 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 GFRA2O00451 464 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 VPS26AO75436 327 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 PAN2Q504Q3 1202 aaKnown RBP18.37■□□□□ 0.53
PRPF39-201ENST00000355765 PAMR1Q6UXH9 720 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 ST13P5Q8NFI4 369 aaPredicted RBP18.37■□□□□ 0.53
PRPF39-201ENST00000355765 TPD52L3Q96J77 140 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 DHRS9Q9BPW9 319 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 MKRN2Q9H000 416 aaKnown RBP18.37■□□□□ 0.53
PRPF39-201ENST00000355765 CLMPQ9H6B4 373 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 TMEM39AQ9NV64 488 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 SPASTQ9UBP0 616 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 IPPQ9Y573 584 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 H3BM21 787 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 GPR39O43194 453 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 ADCYAP1R1P41586 468 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 ST3GAL4Q11206 333 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 DOC2BQ14184 412 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 PRR23CQ6ZRP0 262 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 LAX1Q8IWV1 398 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 FAM217AQ8IXS0 508 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 PLPP6Q8IY26 295 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 BRSK1Q8TDC3 778 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 HSH2DQ96JZ2 352 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 RIPOR3Q96MK2 946 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 PCDHGB2Q9Y5G2 931 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 ACTL7AQ9Y615 435 aa18.37■□□□□ 0.53
PRPF39-201ENST00000355765 AKR7A2O43488 359 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 UGT2B17O75795 530 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 LRATO95237 230 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 FHP07954 510 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 COL6A1P12109 1028 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 PDE12Q6L8Q7 609 aaKnown RBP18.36■□□□□ 0.53
PRPF39-201ENST00000355765 PSAPL1Q6NUJ1 521 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 VANGL1Q8TAA9 524 aaPredicted RBP18.36■□□□□ 0.53
PRPF39-201ENST00000355765 CD200R1Q8TD46 325 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 CNPPD1Q9BV87 410 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 ABCB8Q9NUT2 735 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 GPRC5BQ9NZH0 403 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 MAT2BQ9NZL9 334 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 MICAL3Q7RTP6 2002 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.36■□□□□ 0.53
PRPF39-201ENST00000355765 DARSP14868 501 aaKnown RBP18.36■□□□□ 0.53
PRPF39-201ENST00000355765 TIE1P35590 1138 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 UBXN11Q5T124 520 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 SDE2Q6IQ49 451 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 MSANTD2Q6P1R3 559 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 C3orf58Q8NDZ4 430 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 HRASLS5Q96KN8 279 aa18.36■□□□□ 0.53
PRPF39-201ENST00000355765 DPH2Q9BQC3 489 aaPredicted RBP18.36■□□□□ 0.53
PRPF39-201ENST00000355765 NSUN3Q9H649 340 aaKnown RBP18.36■□□□□ 0.53
PRPF39-201ENST00000355765 SERHLQ9NQF3 203 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms