RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 RAB25P57735 213 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 DSTNP60981 165 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 ADARB1P78563 741 aaKnown RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 CCDC85BQ15834 202 aaPredicted RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 C8orf82Q6P1X6 216 aaPredicted RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 FRS2Q8WU20 508 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 STON2Q8WXE9 905 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 ST6GAL2Q96JF0 529 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 GFM1Q96RP9 751 aaKnown RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 ZIC5Q96T25 663 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 C17orf62Q9BQA9 187 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 CHCHD6Q9BRQ6 235 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 EXOSC4Q9NPD3 245 aaKnown RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 GREB1Q4ZG55 1949 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 ASPDHA6ND91 283 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 BBIP1A8MTZ0 92 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 FFAR3O14843 346 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 STX7O15400 261 aaKnown RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 GPR42O15529 346 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 FAM20BO75063 409 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 SLC22A3O75751 556 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 OAZ2O95190 189 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 PTTG1O95997 202 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 FGF4P08620 206 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 IL7P13232 177 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 HOXD9P28356 352 aaPredicted RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 SLC15A1P46059 708 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 ARHGDIAP52565 204 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 OR4D2P58180 307 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 NFKB2Q00653 900 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 NRG1Q02297 640 aaPredicted RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 SEMG2Q02383 582 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 TOP3AQ13472 1001 aaPredicted RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 SLX4IPQ5VYV7 408 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 IL27RAQ6UWB1 636 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 IDO2Q6ZQW0 420 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 GPSM1Q86YR5 675 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 COLGALT2Q8IYK4 626 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 PCSK9Q8NBP7 692 aaKnown RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 SIMC1Q8NDZ2 872 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 METTL6Q8TCB7 284 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 DYNC2LI1Q8TCX1 351 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 TMEM125Q96AQ2 219 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 TM9SF2Q99805 663 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 GPBP1L1Q9HC44 474 aaPredicted RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 MRPS7Q9Y2R9 242 aaKnown RBP9.14□□□□□ -0.95
SMG6-202ENST00000354901 GPR45Q9Y5Y3 372 aa9.14□□□□□ -0.95
SMG6-202ENST00000354901 IGLV3-10A0A075B6K4 115 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 AGAP5A6NIR3 686 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 C2orf81A6NN90 581 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 AIREO43918 545 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 MITFO75030 526 aaPredicted RBP9.13□□□□□ -0.95
SMG6-202ENST00000354901 VPS26AO75436 327 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 FCGR1AP12314 374 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 PKLRP30613 574 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 SLC26A3P40879 764 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 POLR2JP52435 117 aaKnown RBP9.13□□□□□ -0.95
SMG6-202ENST00000354901 HK3P52790 923 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 TAGLNQ01995 201 aaKnown RBP9.13□□□□□ -0.95
SMG6-202ENST00000354901 RHAGQ02094 409 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 CDC20Q12834 499 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 NR6A1Q15406 480 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 PTCHD3Q3KNS1 767 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 FAM122CQ6P4D5 195 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 SPRED1Q7Z699 444 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 TIGD4Q8IY51 512 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 CPA6Q8N4T0 437 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 ANGPTL6Q8NI99 470 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 NSMCE2Q96MF7 247 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 APOL5Q9BWW9 433 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 SLA2Q9H6Q3 261 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 OPTCQ9UBM4 332 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 OAS3Q9Y6K5 1087 aaKnown RBP9.13□□□□□ -0.95
SMG6-202ENST00000354901 NLRC5Q86WI3 1866 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 A0A1W2PP18 115 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 LCHNA4D1U4 455 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 MTMR11A4FU01 709 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 KCNJ13O60928 360 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 GABARAPO95166 117 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 CYP2A6P11509 494 aaPredicted RBP9.13□□□□□ -0.95
SMG6-202ENST00000354901 PKMP14618 531 aaKnown RBP9.13□□□□□ -0.95
SMG6-202ENST00000354901 JUNBP17275 347 aaPredicted RBP9.13□□□□□ -0.95
SMG6-202ENST00000354901 POU3F3P20264 500 aaPredicted RBP9.13□□□□□ -0.95
SMG6-202ENST00000354901 ATP4BP51164 291 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 PRKCZQ05513 592 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 SELPLGQ14242 412 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 MBTPS1Q14703 1052 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 ZNF181Q2M3W8 571 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 HACD2Q6Y1H2 254 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 GPRIN3Q6ZVF9 776 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 SLC24A5Q71RS6 500 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 MINDY1Q8N5J2 469 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 CAMKK1Q8N5S9 505 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 LINC01599Q8WXQ3 324 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 NCLNQ969V3 563 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 ASB2Q96Q27 587 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 HDHD5Q9BXW7 423 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 SLIRPQ9GZT3 109 aaKnown RBP9.13□□□□□ -0.95
SMG6-202ENST00000354901 KAT8Q9H7Z6 458 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms