RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 MRPS31Q92665 395 aaKnown RBP19■□□□□ 0.63
COL13A1-201ENST00000354547 FRG2BQ96QU4 278 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 BRD9Q9H8M2 597 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 COX7A2P14406 83 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 IRF8Q02556 426 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 EPS8Q12929 822 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 MOGQ16653 247 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 ZNF691Q5VV52 312 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 CPZQ66K79 652 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 USE1Q9NZ43 259 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 ERVK-11Q9UQG0 969 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 PRPS2P11908 318 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 MAPK8P45983 427 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 ABHD18Q0P651 414 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 LRIF1Q5T3J3 769 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 ZNF554Q86TJ5 538 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 ASB11Q8WXH4 323 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 REXO5Q96IC2 774 aaKnown RBP18.99■□□□□ 0.63
COL13A1-201ENST00000354547 RDH12Q96NR8 316 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 SLC12A9Q9BXP2 914 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 DNAJC11Q9NVH1 559 aa18.99■□□□□ 0.63
COL13A1-201ENST00000354547 PDP1Q9P0J1 537 aaPredicted RBP18.99■□□□□ 0.63
COL13A1-201ENST00000354547 C5orf42Q9H799 3197 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 TMEM202A6NGA9 273 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 INHBBP09529 407 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 C1SP09871 688 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 AMD1P17707 334 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 DAPP51397 102 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 GP2P55259 537 aaKnown RBP18.98■□□□□ 0.63
COL13A1-201ENST00000354547 MPPE1Q53F39 396 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 XKR6Q5GH73 641 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 PDE12Q6L8Q7 609 aaKnown RBP18.98■□□□□ 0.63
COL13A1-201ENST00000354547 BTLAQ7Z6A9 289 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 HIPK1Q86Z02 1210 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 SNX29P2Q8IUI4 249 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 LZICQ8WZA0 190 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 ARMC7Q9H6L4 198 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 FAIMQ9NVQ4 179 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 TEX28O15482 410 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 CLPXO76031 633 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 EFEMP2O95967 443 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 ABCB1P08183 1280 aaPredicted RBP18.98■□□□□ 0.63
COL13A1-201ENST00000354547 VLDLRP98155 873 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 EMX1Q04741 257 aaPredicted RBP18.98■□□□□ 0.63
COL13A1-201ENST00000354547 SMU1Q2TAY7 513 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 ANGPTL8Q6UXH0 198 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 HORMAD1Q86X24 394 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 RNF168Q8IYW5 571 aaPredicted RBP18.98■□□□□ 0.63
COL13A1-201ENST00000354547 CBARPQ8N350 705 aaPredicted RBP18.98■□□□□ 0.63
COL13A1-201ENST00000354547 LMNTD1Q8N9Z9 388 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 CMTM7Q96FZ5 175 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 KCNE1BA0A087WTH5 132 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 ZBBXA8MT70 800 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 GFRA2O00451 464 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 NDUFS2O75306 463 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 NUDT7P0C024 238 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 OCM2P0CE71 109 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 OCMP0CE72 109 aaPredicted RBP18.98■□□□□ 0.63
COL13A1-201ENST00000354547 ATP1B2P14415 290 aaPredicted RBP18.98■□□□□ 0.63
COL13A1-201ENST00000354547 OR2T5Q6IEZ7 315 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 C22orf39Q6P5X5 142 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 CHPFQ8IZ52 775 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 LILRA3Q8N6C8 439 aaPredicted RBP18.98■□□□□ 0.63
COL13A1-201ENST00000354547 TMCO5AQ8N6Q1 288 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 ATG16L2Q8NAA4 619 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 GPR156Q8NFN8 814 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 OR2T29Q8NH02 315 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 NELL1Q92832 810 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 MAGED4Q96JG8 741 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 ASIC5Q9NY37 505 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 CCL26Q9Y258 94 aa18.98■□□□□ 0.63
COL13A1-201ENST00000354547 PITPNM1O00562 1244 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 WNT9AO14904 365 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 PPP3CCP48454 512 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 ARHGDIAP52565 204 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 TUBA3CQ13748 450 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 LRRC70Q7Z2Q7 622 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 PIK3C3Q8NEB9 887 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 MAL2Q969L2 176 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 SH3KBP1Q96B97 665 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 ZNF558Q96NG5 402 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 KIF17Q9P2E2 1029 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 SAMHD1Q9Y3Z3 626 aaKnown RBP18.97■□□□□ 0.63
COL13A1-201ENST00000354547 GMPPBQ9Y5P6 360 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 YY2O15391 372 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 CBSLP0DN79 551 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 LAMP1P11279 417 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 WEE1P30291 646 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 CBSP35520 551 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 OPRL1P41146 370 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 RAB33AQ14088 237 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 UGT8Q16880 541 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 CCSMST1Q4G0I0 132 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 LAIR1Q6GTX8 287 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 SLC16A12Q6ZSM3 486 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 Q6ZVL8 140 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 PLPP6Q8IY26 295 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 CENPSQ8N2Z9 138 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 ABHD11Q8NFV4 315 aa18.97■□□□□ 0.63
COL13A1-201ENST00000354547 FIBINQ8TAL6 211 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms