RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 RAD51BO15315 384 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 SNX2O60749 519 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 FKBP6O75344 327 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 ENTPD5O75356 428 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 SKAP2O75563 359 aaPredicted RBP7.99□□□□□ -1.13
CD44-205ENST00000352818 SIX3O95343 332 aaPredicted RBP7.99□□□□□ -1.13
CD44-205ENST00000352818 PSMG1O95456 288 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 ESRRBO95718 433 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 PRR35P0CG20 571 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 ENO3P13929 434 aaPredicted RBP7.99□□□□□ -1.13
CD44-205ENST00000352818 LHCGRP22888 699 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 UGT1A5P35504 534 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 PSMD8P48556 350 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 SPINT3P49223 89 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 MTTPP55157 894 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 SH3BP2P78314 561 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 SLC25A3Q00325 362 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 PTSQ03393 145 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 CUL3Q13618 768 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 GBX1Q14549 363 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 TGFBIQ15582 683 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 KHDC1Q4VXA5 237 aaKnown RBP7.99□□□□□ -1.13
CD44-205ENST00000352818 GPRC6AQ5T6X5 926 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 C1orf146Q5VVC0 180 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 ICE2Q659A1 982 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 TMEM198Q66K66 360 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 GUSBP11Q6P575 273 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 SBSNQ6UWP8 590 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 HACD2Q6Y1H2 254 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 RBM44Q6ZP01 1051 aaKnown RBP7.99□□□□□ -1.13
CD44-205ENST00000352818 RIPOR1Q6ZS17 1223 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 Q6ZVU0 165 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 RPS27LQ71UM5 84 aaKnown RBP7.99□□□□□ -1.13
CD44-205ENST00000352818 B3GNT8Q7Z7M8 397 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 ADGRG6Q86SQ4 1221 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 TSPAN33Q86UF1 283 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 MYLK4Q86YV6 388 aaPredicted RBP7.99□□□□□ -1.13
CD44-205ENST00000352818 PHYKPLQ8IUZ5 450 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 PGAM4Q8N0Y7 254 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 MYO1HQ8N1T3 1032 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 FBXW8Q8N3Y1 598 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 OXR1Q8N573 874 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 ZBTB2Q8N680 514 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 KYQ8NBH2 561 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 GPR26Q8NDV2 337 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 OR56A4Q8NGH8 313 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 TWIST2Q8WVJ9 160 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 WDR60Q8WVS4 1066 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 STMN2Q93045 179 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 EXT2Q93063 718 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 ABHD17AQ96GS6 310 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 PANX3Q96QZ0 392 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 SERPINI1Q99574 410 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 TACO1Q9BSH4 297 aaKnown RBP7.99□□□□□ -1.13
CD44-205ENST00000352818 SHCBP1LQ9BZQ2 653 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 CIPCQ9C0C6 399 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 ABCG4Q9H172 646 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 MID1IP1Q9NPA3 183 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 PFDN4Q9NQP4 134 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 ELOVL2Q9NXB9 296 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 KCTD5Q9NXV2 234 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 FOXJ2Q9P0K8 574 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 STOML1Q9UBI4 398 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 NKX1-2Q9UD57 310 aaPredicted RBP7.99□□□□□ -1.13
CD44-205ENST00000352818 SARDHQ9UL12 918 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 C15orf41Q9Y2V0 281 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 OARD1Q9Y530 152 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 DNAJC15Q9Y5T4 150 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 ST14Q9Y5Y6 855 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 WASF2Q9Y6W5 498 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.99□□□□□ -1.13
CD44-205ENST00000352818 FBN1P35555 2871 aaKnown RBP7.99□□□□□ -1.13
CD44-205ENST00000352818 ATRQ13535 2644 aa7.99□□□□□ -1.13
CD44-205ENST00000352818 A0A0U1RQS6 177 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 PSMD12O00232 456 aaPredicted RBP7.98□□□□□ -1.13
CD44-205ENST00000352818 QSOX1O00391 747 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 E2F3O00716 465 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 PLD2O14939 933 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 GPR39O43194 453 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 AP2A2O94973 939 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 MATN4O95460 622 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 ANP32DO95626 131 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 CHEK2O96017 543 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 S100BP04271 92 aaPredicted RBP7.98□□□□□ -1.13
CD44-205ENST00000352818 UGT2B4P06133 528 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 ENO2P09104 434 aaPredicted RBP7.98□□□□□ -1.13
CD44-205ENST00000352818 UROSP10746 265 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 CA5AP35218 305 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 NNMTP40261 264 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 NUDT2P50583 147 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 HK3P52790 923 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 CDKL1Q00532 357 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 TBL3Q12788 808 aaKnown RBP7.98□□□□□ -1.13
CD44-205ENST00000352818 KLRB1Q12918 225 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 STX5Q13190 355 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 FASTKQ14296 549 aaKnown RBP7.98□□□□□ -1.13
CD44-205ENST00000352818 EIF4HQ15056 248 aaKnown RBP7.98□□□□□ -1.13
CD44-205ENST00000352818 GSTA3Q16772 222 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 EIF2S3LQ2VIR3 472 aaKnown RBP7.98□□□□□ -1.13
CD44-205ENST00000352818 ACCSLQ4AC99 568 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms