RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ABRQ12979 859 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 DUOXA1Q1HG43 343 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 ZC3H12BQ5HYM0 836 aaKnown RBP21.47■■□□□ 1.03
UPF3A-201ENST00000351487 HENMT1Q5T8I9 393 aaKnown RBP21.47■■□□□ 1.03
UPF3A-201ENST00000351487 DOK6Q6PKX4 331 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 R3HCC1LQ7Z5L2 792 aaKnown RBP21.47■■□□□ 1.03
UPF3A-201ENST00000351487 TRAM1L1Q8N609 369 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 WDR20Q8TBZ3 569 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 TIFAQ96CG3 184 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 DCUN1D5Q9BTE7 237 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 KLHL33A6NCF5 533 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 E2F6O75461 281 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 PSIP1O75475 530 aaKnown RBP21.47■■□□□ 1.03
UPF3A-201ENST00000351487 IL7RP16871 459 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 IRF8Q02556 426 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 BIRC2Q13490 618 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 C6orf141Q5SZD1 244 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 ELMSAN1Q6PJG2 1045 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 GPR155Q7Z3F1 870 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 IRF7Q92985 503 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 PHF12Q96QT6 1004 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 HEPHQ9BQS7 1158 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 REXO4Q9GZR2 422 aaKnown RBP21.47■■□□□ 1.03
UPF3A-201ENST00000351487 FANCEQ9HB96 536 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 TMEFF2Q9UIK5 374 aaPredicted RBP21.47■■□□□ 1.03
UPF3A-201ENST00000351487 ATP11BQ9Y2G3 1177 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 QSOX1O00391 747 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 CCL16O15467 120 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 SCN2BO60939 215 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 EFCAB14O75071 495 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 GSTM2P28161 218 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 TMBIM6P55061 237 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 UGT8Q16880 541 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 ANKRD34AQ69YU3 496 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 Q6ZVL8 140 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 RBM23Q86U06 439 aaKnown RBP21.46■■□□□ 1.03
UPF3A-201ENST00000351487 KLHDC8AQ8IYD2 350 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 SLC22A15Q8IZD6 547 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 METTL2AQ96IZ6 378 aaKnown RBP21.46■■□□□ 1.03
UPF3A-201ENST00000351487 GABARAPL1Q9H0R8 117 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 ADNPQ9H2P0 1102 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 RAD18Q9NS91 495 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 SPATA6Q9NWH7 488 aaPredicted RBP21.46■■□□□ 1.03
UPF3A-201ENST00000351487 BLOC1S6Q9UL45 172 aa21.46■■□□□ 1.03
UPF3A-201ENST00000351487 ARHGEF33A8MVX0 844 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 EVPLLA8MZ36 301 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 SLC16A6O15403 523 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 HS6ST1O60243 411 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 TYRP14679 529 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 EPHA5P54756 1037 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 WNT3P56703 355 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 IL18R1Q13478 541 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.45■■□□□ 1.03
UPF3A-201ENST00000351487 CPZQ66K79 652 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 SHQ1Q6PI26 577 aaKnown RBP21.45■■□□□ 1.03
UPF3A-201ENST00000351487 SYT12Q8IV01 421 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 ARL10Q8N8L6 244 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 OR8J2Q8NGG1 315 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 C11orf24Q96F05 449 aaPredicted RBP21.45■■□□□ 1.03
UPF3A-201ENST00000351487 MAGED4Q96JG8 741 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 ZSCAN5AQ9BUG6 496 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 EBPLQ9BY08 206 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 NAA50Q9GZZ1 169 aaKnown RBP21.45■■□□□ 1.03
UPF3A-201ENST00000351487 LTB4R2Q9NPC1 389 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 AASDHPPTQ9NRN7 309 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 HCFC1R1Q9NWW0 138 aa21.45■■□□□ 1.03
UPF3A-201ENST00000351487 LOC100130705A0A1B0GUX0 176 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 FADS2P1A8MWK0 482 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 UPK3BL1B0FP48 263 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 UPK3BL2E5RIL1 263 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 CLTBP09497 229 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 LINC00271P0C7V0 271 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 GPX2P18283 190 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 DDX6P26196 483 aaKnown RBP eCLIP21.45■■□□□ 1.02
UPF3A-201ENST00000351487 STT3AP46977 705 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 RAD23AP54725 363 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 TPD52P55327 224 aaPredicted RBP21.45■■□□□ 1.02
UPF3A-201ENST00000351487 PCDH1Q08174 1060 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 CD47Q08722 323 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 TOP3AQ13472 1001 aaPredicted RBP21.45■■□□□ 1.02
UPF3A-201ENST00000351487 CTU2Q2VPK5 515 aaKnown RBP21.45■■□□□ 1.02
UPF3A-201ENST00000351487 ZNF691Q5VV52 312 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 KIAA0907Q7Z7F0 614 aaPredicted RBP21.45■■□□□ 1.02
UPF3A-201ENST00000351487 DCP2Q8IU60 420 aaKnown RBP21.45■■□□□ 1.02
UPF3A-201ENST00000351487 ZDHHC21Q8IVQ6 265 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 RNF175Q8N4F7 328 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 FRS2Q8WU20 508 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 NRBF2Q96F24 287 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 PCDH12Q9NPG4 1184 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 SPHK2Q9NRA0 654 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 FAM120CQ9NX05 1096 aaKnown RBP21.45■■□□□ 1.02
UPF3A-201ENST00000351487 VPS29Q9UBQ0 182 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 ERVW-1Q9UQF0 538 aa21.45■■□□□ 1.02
UPF3A-201ENST00000351487 A0A1W2PPW3 197 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 FPGTO14772 594 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 NOL3O60936 208 aaKnown RBP21.44■■□□□ 1.02
UPF3A-201ENST00000351487 LEFTY1O75610 366 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 CXCL14O95715 111 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 ITGAMP11215 1152 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 HSD3B1P14060 373 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms