RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 TMEM202A6NGA9 273 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 FBP2O00757 339 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 LILRB5O75023 590 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 KLF8O95600 359 aaPredicted RBP12.46□□□□□ -0.42
CLK3-201ENST00000345005 CATP04040 527 aaKnown RBP12.46□□□□□ -0.42
CLK3-201ENST00000345005 DNTTP04053 509 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 HGFP14210 728 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 DCKP27707 260 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 GDF5P43026 501 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 ABRQ12979 859 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 TRAF3Q13114 568 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 TUBA3CQ13748 450 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 LCN8Q6JVE9 175 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 KIAA1211LQ6NV74 962 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 MBOAT1Q6ZNC8 495 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 NCCRP1Q6ZVX7 275 aaPredicted RBP12.46□□□□□ -0.42
CLK3-201ENST00000345005 LRRC70Q7Z2Q7 622 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 CACUL1Q86Y37 369 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 CLVS1Q8IUQ0 354 aaPredicted RBP12.46□□□□□ -0.42
CLK3-201ENST00000345005 TRAPPC5Q8IUR0 188 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 FBXL8Q96CD0 374 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 NRBF2Q96F24 287 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 COX14Q96I36 57 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 LINC00615Q96LM1 132 aaPredicted RBP12.46□□□□□ -0.42
CLK3-201ENST00000345005 GAS2L1Q99501 681 aaPredicted RBP12.46□□□□□ -0.42
CLK3-201ENST00000345005 SLC29A1Q99808 456 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 CIB1Q99828 191 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 ADI1Q9BV57 179 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 PCDHAC1Q9H158 963 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 HEBP1Q9NRV9 189 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 FBXL12Q9NXK8 326 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 CCDC167Q9P0B6 97 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 FAM8A1Q9UBU6 413 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 LIMD1Q9UGP4 676 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 POLG2Q9UHN1 485 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 SCML1Q9UN30 329 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 ST14Q9Y5Y6 855 aa12.46□□□□□ -0.42
CLK3-201ENST00000345005 RNF103-CHMP3A0A140T963 221 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 DHRS12A0PJE2 317 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 ADAM23O75077 832 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 RASAL1O95294 804 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 CAPN1P07384 714 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 EBLN1P0CF75 366 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 HOXB2P14652 356 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 GLULP15104 373 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 ZNF8P17098 575 aaPredicted RBP12.45□□□□□ -0.42
CLK3-201ENST00000345005 TEAD1P28347 426 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 PBLDP30039 288 aaPredicted RBP12.45□□□□□ -0.42
CLK3-201ENST00000345005 RPS21P63220 83 aaKnown RBP12.45□□□□□ -0.42
CLK3-201ENST00000345005 SMAD4Q13485 552 aaKnown RBP12.45□□□□□ -0.42
CLK3-201ENST00000345005 SLC36A3Q495N2 470 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 ZNF658BQ4V348 819 aaPredicted RBP12.45□□□□□ -0.42
CLK3-201ENST00000345005 XKR7Q5GH72 579 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 TBCELQ5QJ74 424 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 C6orf10Q5SRN2 563 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 OGFOD2Q6N063 350 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 CFAP206Q8IYR0 622 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 PLA2G15Q8NCC3 412 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 ATL1Q8WXF7 558 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 GUCD1Q96NT3 240 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 CDK15Q96Q40 435 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 GPATCH1Q9BRR8 931 aaKnown RBP12.45□□□□□ -0.42
CLK3-201ENST00000345005 MKRN2Q9H000 416 aaKnown RBP12.45□□□□□ -0.42
CLK3-201ENST00000345005 AGPAT4Q9NRZ5 378 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 TRPS1Q9UHF7 1281 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 PTGDR2Q9Y5Y4 395 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 PCM1Q15154 2024 aa12.45□□□□□ -0.42
CLK3-201ENST00000345005 TRIM64BA6NI03 449 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 H0YAE9 185 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 H3BM21 787 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 MBTPS2O43462 519 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 WDR47O94967 919 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 PCCBP05166 539 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 PRR35P0CG20 571 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 SLC6A12P48065 614 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 PREPP48147 710 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 MRPL19P49406 292 aaKnown RBP12.44□□□□□ -0.42
CLK3-201ENST00000345005 SGCGQ13326 291 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 GRB7Q14451 532 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 ATP6AP1Q15904 470 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 MOGQ16653 247 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 WSCD2Q2TBF2 565 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 KIAA1161Q6NSJ0 714 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 HMBOX1Q6NT76 420 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 SPRED1Q7Z699 444 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 HEATR4Q86WZ0 1026 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 TBC1D21Q8IYX1 336 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 ZNF786Q8N393 782 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 FAM156AQ8NDB6 213 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 TRPV3Q8NET8 790 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 FAM131CQ96AQ9 280 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 CCDC138Q96M89 665 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 C1orf50Q9BV19 199 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 CXorf21Q9HAI6 301 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 SERGEFQ9UGK8 458 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 A0A1W2PQF6 199 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 ARHGEF33A8MVX0 844 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 ANGPT2O15123 496 aa12.44□□□□□ -0.42
CLK3-201ENST00000345005 PLRG1O43660 514 aaKnown RBP12.44□□□□□ -0.42
CLK3-201ENST00000345005 POP7O75817 140 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms