RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 C18orf25Q96B23 403 aaPredicted RBP7.92□□□□□ -1.14
ATG4A-201ENST00000343524 COQ8BQ96D53 544 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 SGTBQ96EQ0 304 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 AHCYL2Q96HN2 611 aaKnown RBP7.92□□□□□ -1.14
ATG4A-201ENST00000343524 RADILQ96JH8 1075 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 ZBTB45Q96K62 511 aaPredicted RBP7.92□□□□□ -1.14
ATG4A-201ENST00000343524 SERPINB11Q96P15 392 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 DPYSL5Q9BPU6 564 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 KCNS3Q9BQ31 491 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 ELOVL4Q9GZR5 314 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 RAB6CQ9H0N0 254 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 NT5DC2Q9H857 520 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 LTB4R2Q9NPC1 389 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 FANCFQ9NPI8 374 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 KRT84Q9NSB2 600 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 ABCB8Q9NUT2 735 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 CUEDC1Q9NWM3 386 aaPredicted RBP7.92□□□□□ -1.14
ATG4A-201ENST00000343524 SPASTQ9UBP0 616 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 ALG5Q9Y673 324 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 STON1Q9Y6Q2 735 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 LRRC37AA6NMS7 1700 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF98A6NK75 572 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 WASHC1A8K0Z3 465 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 AKR7A2O43488 359 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 FZD6O60353 706 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 TSC22D2O75157 780 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 OR5F1O95221 314 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 IFNA14P01570 189 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 PGRP06401 933 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 GJB1P08034 283 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 HOXC6P09630 235 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 SLC2A3P11169 496 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 HLA-EP13747 358 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 BRCC3P46736 316 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 HOXA1P49639 335 aaPredicted RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 CLCN3P51790 818 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 DGKQP52824 942 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 PLK1P53350 603 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ARPP19P56211 112 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 CLDN20P56880 219 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 SNRPD2P62316 118 aaKnown RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 HSF2Q03933 536 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 SEMA3AQ14563 771 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF273Q14593 569 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 PON2Q15165 354 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF79Q15937 498 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 LDLRAD1Q5T700 205 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ARHGAP17Q68EM7 881 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 RETSATQ6NUM9 610 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ANKRD54Q6NXT1 300 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 C19orf48Q6RUI8 117 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 SNX20Q7Z614 316 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 FAM126BQ8IXS8 530 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 HS3ST5Q8IZT8 346 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 CYP4Z2PQ8N1L4 340 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 CHCHD4Q8N4Q1 142 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ZBTB44Q8NCP5 570 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 C3orf58Q8NDZ4 430 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 C19orf18Q8NEA5 215 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 UBA3Q8TBC4 463 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 GPR151Q8TDV0 419 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF431Q8TF32 576 aaPredicted RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ELMO1Q92556 727 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 AP3S1Q92572 193 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 FBXW5Q969U6 566 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 MARC2Q969Z3 335 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 TEKT5Q96M29 485 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 SAMD11Q96NU1 681 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 MCCC1Q96RQ3 725 aaPredicted RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ZBTB18Q99592 522 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 SPSB2Q99619 263 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 USB1Q9BQ65 265 aaKnown RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 TBCDQ9BTW9 1192 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 PRRG3Q9BZD7 231 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 TRIM8Q9BZR9 551 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 C11orf54Q9H0W9 315 aaPredicted RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 OR51E2Q9H255 320 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 LDAHQ9H6V9 325 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 EMC7Q9NPA0 242 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 DCAF13Q9NV06 445 aaKnown RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 RBFOX1Q9NWB1 397 aaKnown RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 SEC14L4Q9UDX3 406 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 FZD10Q9ULW2 581 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 TMX2Q9Y320 296 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 MAB21L2Q9Y586 359 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 HRH3Q9Y5N1 445 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 A0A0B4J293 547 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 MROH6A6NGR9 719 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 SLC30A4O14863 429 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 KHNYNO15037 678 aaKnown RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 GMDSO60547 372 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ANXA9O76027 345 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 STBD1O95210 358 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 GDF11O95390 407 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 LGI1O95970 557 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 UROSP10746 265 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 CD9P21926 228 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 KCNA5P22460 613 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ARL2P36404 184 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 NUP62P37198 522 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms