RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 CYP2R1Q6VVX0 501 aa19.34■□□□□ 0.69
RTN1-202ENST00000342503 USP30Q70CQ3 517 aa19.34■□□□□ 0.69
RTN1-202ENST00000342503 SLC13A3Q8WWT9 602 aa19.34■□□□□ 0.69
RTN1-202ENST00000342503 FCRL1Q96LA6 429 aa19.34■□□□□ 0.69
RTN1-202ENST00000342503 MRGPRX1Q96LB2 322 aa19.34■□□□□ 0.69
RTN1-202ENST00000342503 ZNF570Q96NI8 536 aa19.34■□□□□ 0.69
RTN1-202ENST00000342503 TMEM74Q96NL1 305 aa19.34■□□□□ 0.69
RTN1-202ENST00000342503 APOOQ9BUR5 198 aa19.34■□□□□ 0.69
RTN1-202ENST00000342503 NANOGQ9H9S0 305 aa19.34■□□□□ 0.69
RTN1-202ENST00000342503 CD93Q9NPY3 652 aa19.34■□□□□ 0.69
RTN1-202ENST00000342503 CCDC177Q9NQR7 707 aaPredicted RBP19.34■□□□□ 0.69
RTN1-202ENST00000342503 UNC80Q8N2C7 3258 aa19.33■□□□□ 0.69
RTN1-202ENST00000342503 KLHL33A6NCF5 533 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 IL6P05231 212 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 C8BP07358 591 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 ACADMP11310 421 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 ACPPP15309 386 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 TACR1P25103 407 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 RPL10P27635 214 aaKnown RBP19.33■□□□□ 0.68
RTN1-202ENST00000342503 CLCNKAP51800 687 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 SPATS1Q496A3 300 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 ATG9BQ674R7 924 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 NOXRED1Q6NXP6 359 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 KIAA1324Q6UXG2 1013 aaKnown RBP19.33■□□□□ 0.68
RTN1-202ENST00000342503 DHFR2Q86XF0 187 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 HID1Q8IV36 788 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 KBTBD2Q8IY47 623 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 OR7G3Q8NG95 312 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 OR5K2Q8NHB8 316 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 SLC5A11Q8WWX8 675 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 WDR34Q96EX3 536 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 TSSK3Q96PN8 268 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 VPS29Q9UBQ0 182 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 ACSL5Q9ULC5 683 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 SLC17A4Q9Y2C5 497 aa19.33■□□□□ 0.68
RTN1-202ENST00000342503 TNRC18O15417 2968 aaPredicted RBP19.32■□□□□ 0.68
RTN1-202ENST00000342503 KANSL1LA0AUZ9 987 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 SHISA7A6NL88 538 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 PI15O43692 258 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 RPSAP08865 295 aaKnown RBP19.32■□□□□ 0.68
RTN1-202ENST00000342503 SLC35G4P0C7Q5 338 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 C1GALT1C1LP0DN25 315 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 HSD3B1P14060 373 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 NDUFV2P19404 249 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 HSD3B2P26439 372 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 PLIN5Q00G26 463 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 LIPEQ05469 1076 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 DMPKQ09013 629 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 SMAD4Q13485 552 aaKnown RBP19.32■□□□□ 0.68
RTN1-202ENST00000342503 EOGTQ5NDL2 527 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 LPCAT4Q643R3 524 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 MED27Q6P2C8 311 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 PQLC1Q8N2U9 271 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 C2orf73Q8N5S3 287 aaPredicted RBP19.32■□□□□ 0.68
RTN1-202ENST00000342503 SETD7Q8WTS6 366 aaKnown RBP19.32■□□□□ 0.68
RTN1-202ENST00000342503 TIMM29Q9BSF4 260 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 EBPLQ9BY08 206 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 RMI1Q9H9A7 625 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 BRF2Q9HAW0 419 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 PLEKHM1Q9Y4G2 1056 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 MYO10Q9HD67 2058 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 PCM1Q15154 2024 aa19.32■□□□□ 0.68
RTN1-202ENST00000342503 C15orf38-AP3S2A0A0A6YYH1 394 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 TCRBV3S1A0A5B6 114 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 MAGEB17A8MXT2 336 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 STAMBPO95630 424 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 RPN2P04844 631 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 PGRP06401 933 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 C7P10643 843 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 ATP6V1B2P21281 511 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 GSK3BP49841 420 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 CLNS1AP54105 237 aaKnown RBP19.31■□□□□ 0.68
RTN1-202ENST00000342503 EEFSECP57772 596 aaKnown RBP19.31■□□□□ 0.68
RTN1-202ENST00000342503 BNIP2Q12982 314 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 SLBPQ14493 270 aaKnown RBP eCLIP19.31■□□□□ 0.68
RTN1-202ENST00000342503 LRIT3Q3SXY7 679 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 THEMIS2Q5TEJ8 643 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 CAPRIN2Q6IMN6 1127 aaKnown RBP19.31■□□□□ 0.68
RTN1-202ENST00000342503 DUS1LQ6P1R4 473 aaKnown RBP19.31■□□□□ 0.68
RTN1-202ENST00000342503 NXPE4Q6UWF7 544 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 PRR23BQ6ZRT6 265 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 ARPINQ7Z6K5 226 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 FAM9CQ8IZT9 166 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 PLCD3Q8N3E9 789 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 HUS1BQ8NHY5 278 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 ASB12Q8WXK4 309 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 GTF2H4Q92759 462 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 LRGUKQ96M69 825 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 PPM1MQ96MI6 270 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 CGREF1Q99674 301 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 NRTNQ99748 197 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 GEMIN8Q9NWZ8 242 aaKnown RBP19.31■□□□□ 0.68
RTN1-202ENST00000342503 C6orf203Q9P0P8 240 aaPredicted RBP19.31■□□□□ 0.68
RTN1-202ENST00000342503 EGFL7Q9UHF1 273 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 MOSPD1Q9UJG1 213 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 KCNK6Q9Y257 313 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 WDR37Q9Y2I8 494 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 TMEM265A0A087WTH1 108 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 PRSS51A0A1B0GVH4 220 aa19.31■□□□□ 0.68
RTN1-202ENST00000342503 CACNB4O00305 520 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms