RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 CATSPERBQ9H7T0 1116 aa18.04■□□□□ 0.48
SMPD1-201ENST00000342245 SEMA4BQ9NPR2 832 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-201ENST00000342245 C1orf109Q9NX04 203 aa18.04■□□□□ 0.48
SMPD1-201ENST00000342245 PCDHGA6Q9Y5G7 932 aa18.04■□□□□ 0.48
SMPD1-201ENST00000342245 ZNF638Q14966 1978 aaKnown RBP18.04■□□□□ 0.48
SMPD1-201ENST00000342245 ORC5O43913 435 aa18.04■□□□□ 0.48
SMPD1-201ENST00000342245 SLC43A1O75387 559 aa18.04■□□□□ 0.48
SMPD1-201ENST00000342245 CNPP09543 421 aaKnown RBP18.04■□□□□ 0.48
SMPD1-201ENST00000342245 AZGP1P25311 298 aaKnown RBP18.04■□□□□ 0.48
SMPD1-201ENST00000342245 MAP2K3P46734 347 aa18.04■□□□□ 0.48
SMPD1-201ENST00000342245 GBX2P52951 348 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-201ENST00000342245 OTUD1Q5VV17 481 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-201ENST00000342245 DCAF15Q66K64 600 aa18.04■□□□□ 0.48
SMPD1-201ENST00000342245 KIAA1324Q6UXG2 1013 aaKnown RBP18.04■□□□□ 0.48
SMPD1-201ENST00000342245 DGLUCYQ7Z3D6 616 aa18.04■□□□□ 0.48
SMPD1-201ENST00000342245 VANGL1Q8TAA9 524 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-201ENST00000342245 FAM149B1Q96BN6 582 aa18.04■□□□□ 0.48
SMPD1-201ENST00000342245 PABPC5Q96DU9 382 aaKnown RBP18.04■□□□□ 0.48
SMPD1-201ENST00000342245 FSD1LQ9BXM9 530 aa18.04■□□□□ 0.48
SMPD1-201ENST00000342245 TMEM39BQ9GZU3 492 aa18.04■□□□□ 0.48
SMPD1-201ENST00000342245 RANBP3Q9H6Z4 567 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-201ENST00000342245 GLOD4Q9HC38 313 aa18.04■□□□□ 0.48
SMPD1-201ENST00000342245 RGS18Q9NS28 235 aa18.04■□□□□ 0.48
SMPD1-201ENST00000342245 MIOSQ9NXC5 875 aa18.04■□□□□ 0.48
SMPD1-201ENST00000342245 BRCA1P38398 1863 aaKnown RBP18.03■□□□□ 0.48
SMPD1-201ENST00000342245 WASHC1A8K0Z3 465 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 A8MUA0 341 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 MYO1GB0I1T2 1018 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 B3GALNT1O75752 331 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 TPOP07202 933 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 SUOXP51687 545 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 CAMK2GQ13555 558 aaPredicted RBP18.03■□□□□ 0.48
SMPD1-201ENST00000342245 OR4D1Q15615 310 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 TMEM192Q8IY95 271 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 GHDCQ8N2G8 530 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 OR56A4Q8NGH8 313 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 OR2T11Q8NH01 316 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 TRPM4Q8TD43 1214 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 FAM167AQ96KS9 214 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 STUB1Q9UNE7 303 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 LRRC14BA6NHZ5 514 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 WASH4PA8MWX3 477 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 DPM1O60762 260 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 PTHP01270 115 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 F8A1P23610 371 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 GGT2P36268 569 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 MAPKAPK3Q16644 382 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 TMEM81Q6P7N7 255 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 ATCAYQ86WG3 371 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 CALHM3Q86XJ0 350 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 LAX1Q8IWV1 398 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 RBFAQ8N0V3 343 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 RYBPQ8N488 228 aaPredicted RBP18.03■□□□□ 0.48
SMPD1-201ENST00000342245 ZNF366Q8N895 744 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 OR7G3Q8NG95 312 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 SPATA22Q8NHS9 363 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 FAM151AQ8WW52 585 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 CIDECQ96AQ7 238 aaPredicted RBP18.03■□□□□ 0.48
SMPD1-201ENST00000342245 OPALINQ96PE5 141 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 CDCA4Q9BXL8 241 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 CCSER2Q9H7U1 834 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 TMPRSS4Q9NRS4 437 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 RBFOX1Q9NWB1 397 aaKnown RBP18.03■□□□□ 0.48
SMPD1-201ENST00000342245 GMEB2Q9UKD1 530 aa18.03■□□□□ 0.48
SMPD1-201ENST00000342245 UBA6A0AVT1 1052 aaPredicted RBP18.02■□□□□ 0.48
SMPD1-201ENST00000342245 TUBAL3A6NHL2 446 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 ASB14A6NK59 587 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 CCNDBP1O95273 360 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 RAF1P04049 648 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 HSMCR30P0CW71 290 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 RRASP10301 218 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 HTR7P34969 479 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 ZNF605Q86T29 641 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 ZZZ3Q8IYH5 903 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 PGBD3Q8N328 593 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 CHCHD4Q8N4Q1 142 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 DENND6BQ8NEG7 585 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 NETO1Q8TDF5 533 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 B3GALT6Q96L58 329 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 MGLLQ99685 303 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 BARD1Q99728 777 aaKnown RBP18.02■□□□□ 0.48
SMPD1-201ENST00000342245 MRPL45Q9BRJ2 306 aaKnown RBP18.02■□□□□ 0.48
SMPD1-201ENST00000342245 MFSD1Q9H3U5 465 aa18.02■□□□□ 0.48
SMPD1-201ENST00000342245 FABP12A6NFH5 140 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 SUPT3HB4E1H0 165 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 TSC22D2O75157 780 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 S1PR4O95977 384 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 HLA-DQB1P01920 261 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 CSF2P04141 144 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 PGRP06401 933 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 PRKAR1AP10644 381 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 PTX3P26022 381 aaPredicted RBP18.01■□□□□ 0.47
SMPD1-201ENST00000342245 CLDN20P56880 219 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 RAB14P61106 215 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 KIAA0040Q15053 153 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 NLGN4YQ8NFZ3 816 aaPredicted RBP18.01■□□□□ 0.47
SMPD1-201ENST00000342245 GPR152Q8TDT2 470 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 UBE2FQ969M7 185 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 KIAA1191Q96A73 305 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 FAM120BQ96EK7 910 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms