RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 LRRC32Q14392 662 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 MARCH8Q5T0T0 291 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 RTL4Q6ZR62 310 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 COL21A1Q96P44 957 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 PHF12Q96QT6 1004 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 RANBP9Q96S59 729 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 OR51B5Q9H339 312 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 GALNT8Q9NY28 637 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 PGRMC2O15173 223 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 ALAS2P22557 587 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 PTX3P26022 381 aaPredicted RBP18.84■□□□□ 0.61
CDK13-202ENST00000340829 ACTR1BP42025 376 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 ACTR1AP61163 376 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 PCDH1Q08174 1060 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 PTGR1Q14914 329 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 ANKRD26P1Q6NSI1 321 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 CXorf57Q6NSI4 855 aaKnown RBP18.84■□□□□ 0.61
CDK13-202ENST00000340829 TMPRSS11AQ6ZMR5 421 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 GPR135Q8IZ08 494 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 LGI4Q8N135 537 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 CLIP4Q8N3C7 705 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 OXR1Q8N573 874 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 HPS1Q92902 700 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 TRMT61BQ9BVS5 477 aaKnown RBP18.84■□□□□ 0.61
CDK13-202ENST00000340829 CARS2Q9HA77 564 aaKnown RBP18.84■□□□□ 0.61
CDK13-202ENST00000340829 CLEC4AQ9UMR7 237 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 TMED5Q9Y3A6 229 aa18.84■□□□□ 0.61
CDK13-202ENST00000340829 CLK3P49761 638 aaKnown RBP18.83■□□□□ 0.61
CDK13-202ENST00000340829 TRIM74Q86UV6 250 aa18.83■□□□□ 0.61
CDK13-202ENST00000340829 CELF5Q8N6W0 485 aaKnown RBP18.83■□□□□ 0.61
CDK13-202ENST00000340829 RHEBL1Q8TAI7 183 aa18.83■□□□□ 0.61
CDK13-202ENST00000340829 PEX13Q92968 403 aa18.83■□□□□ 0.61
CDK13-202ENST00000340829 CLEC4MQ9H2X3 399 aaPredicted RBP18.83■□□□□ 0.61
CDK13-202ENST00000340829 MAGEE1Q9HCI5 957 aa18.83■□□□□ 0.61
CDK13-202ENST00000340829 ZBTB42B2RXF5 422 aa18.83■□□□□ 0.61
CDK13-202ENST00000340829 ANXA8P13928 327 aa18.83■□□□□ 0.61
CDK13-202ENST00000340829 LMAN2Q12907 356 aa18.83■□□□□ 0.61
CDK13-202ENST00000340829 NANOGP8Q6NSW7 305 aa18.83■□□□□ 0.61
CDK13-202ENST00000340829 PRR23BQ6ZRT6 265 aa18.83■□□□□ 0.61
CDK13-202ENST00000340829 NANOGQ9H9S0 305 aa18.83■□□□□ 0.61
CDK13-202ENST00000340829 TRNAU1APQ9NX07 287 aaKnown RBP18.83■□□□□ 0.61
CDK13-202ENST00000340829 H0YC42 278 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 PRSS56P0CW18 603 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 IL7RP16871 459 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 AZGP1P25311 298 aaKnown RBP18.83■□□□□ 0.6
CDK13-202ENST00000340829 NUP62P37198 522 aaPredicted RBP18.83■□□□□ 0.6
CDK13-202ENST00000340829 KHKP50053 298 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 CEACAM7Q14002 265 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 CARTPTQ16568 116 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 LRRTM4Q86VH4 590 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 TP53INP1Q96A56 240 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 POLR2J3Q9H1A7 115 aaKnown RBP18.83■□□□□ 0.6
CDK13-202ENST00000340829 WDR6Q9NNW5 1121 aaKnown RBP18.83■□□□□ 0.6
CDK13-202ENST00000340829 PLOD3O60568 738 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 OAZ2O95190 189 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 SYN1P17600 705 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 DDX6P26196 483 aaKnown RBP eCLIP18.83■□□□□ 0.6
CDK13-202ENST00000340829 RCVRNP35243 200 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 DSTNP60981 165 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 MEAF6Q9HAF1 191 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 TPT1P8Q9HAU6 139 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 CALML5Q9NZT1 146 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 ADAMTS6Q9UKP5 1117 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 ITGB4P16144 1822 aa18.83■□□□□ 0.6
CDK13-202ENST00000340829 CLDN25C9JDP6 229 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 AXIN1O15169 862 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 ALOX5P09917 674 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 CRISP3P54108 245 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 RPS13P62277 151 aaKnown RBP18.82■□□□□ 0.6
CDK13-202ENST00000340829 LAPTM4AQ15012 233 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 NPTX1Q15818 432 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 NEK5Q6P3R8 708 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 SUSD1Q6UWL2 747 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 TFGQ92734 400 aaPredicted RBP18.82■□□□□ 0.6
CDK13-202ENST00000340829 TMEM98Q9Y2Y6 226 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 K7ERQ8 282 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 CCNIQ14094 377 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 SMARCD3Q6STE5 483 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 USP30Q70CQ3 517 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 KRT74Q7RTS7 529 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 ADAP2Q9NPF8 381 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 SOCS5O75159 536 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 RB1P06400 928 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 ZNF8P17098 575 aaPredicted RBP18.82■□□□□ 0.6
CDK13-202ENST00000340829 ETV4P43268 484 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 MINDY4Q4G0A6 757 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 ZNF554Q86TJ5 538 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 TMEM145Q8NBT3 493 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 WBP11Q9Y2W2 641 aaKnown RBP18.82■□□□□ 0.6
CDK13-202ENST00000340829 FESP07332 822 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 ABHD18Q0P651 414 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 DPY19L3Q6ZPD9 716 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 ZNF248Q8NDW4 579 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 RBM18Q96H35 190 aaKnown RBP18.82■□□□□ 0.6
CDK13-202ENST00000340829 DIRAS2Q96HU8 199 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 PKP4Q99569 1192 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 COQ7Q99807 217 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 CNPPD1Q9BV87 410 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 SPATA7Q9P0W8 599 aa18.82■□□□□ 0.6
CDK13-202ENST00000340829 COQ6Q9Y2Z9 468 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms