RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 A0A1W2PQ67 120 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 KDM4EB2RXH2 506 aaPredicted RBP10.45□□□□□ -0.74
ATXN3-201ENST00000340660 MATN2O00339 956 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 BTN3A3O00478 584 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 BIN1O00499 593 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 SLC25A12O75746 678 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 ZGLP1P0C6A0 271 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 IGFBP5P24593 272 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 CASP9P55211 416 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 CAMK4Q16566 473 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 VASNQ6EMK4 673 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 POMZP3Q6PJE2 187 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 FAM83HQ6ZRV2 1179 aaPredicted RBP10.45□□□□□ -0.74
ATXN3-201ENST00000340660 RFLNBQ8N5W9 214 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 NAXEQ8NCW5 288 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 STT3BQ8TCJ2 826 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 PIH1D2Q8WWB5 315 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 IMMP1LQ96LU5 166 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 ZNF354BQ96LW1 612 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 ACP6Q9NPH0 428 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 FAM8A1Q9UBU6 413 aa10.45□□□□□ -0.74
ATXN3-201ENST00000340660 MTRF1LQ9UGC7 380 aaKnown RBP10.45□□□□□ -0.74
ATXN3-201ENST00000340660 WBP11Q9Y2W2 641 aaKnown RBP10.45□□□□□ -0.74
ATXN3-201ENST00000340660 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.44□□□□□ -0.74
ATXN3-201ENST00000340660 QSOX1O00391 747 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 BTN3A1O00481 513 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 MTX2O75431 263 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 PGLSO95336 258 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 UGT1A1P22309 533 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 PSMC2P35998 433 aaKnown RBP10.44□□□□□ -0.74
ATXN3-201ENST00000340660 FLT3P36888 993 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 VSX2P58304 361 aaPredicted RBP10.44□□□□□ -0.74
ATXN3-201ENST00000340660 TMEM249Q2WGJ8 235 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 KHDC1Q4VXA5 237 aaKnown RBP10.44□□□□□ -0.74
ATXN3-201ENST00000340660 ACAD10Q6JQN1 1059 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 H3F3CQ6NXT2 135 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 ARHGEF18Q6ZSZ5 1173 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 TRIM73Q86UV7 250 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 CRLF3Q8IUI8 442 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 ELOA2Q8IYF1 753 aaPredicted RBP10.44□□□□□ -0.74
ATXN3-201ENST00000340660 POGLUT1Q8NBL1 392 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 ZNF606Q8WXB4 792 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 DLG3Q92796 817 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 ZNF700Q9H0M5 742 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 TRAF3IP3Q9Y228 551 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 CLIC4Q9Y696 253 aa10.44□□□□□ -0.74
ATXN3-201ENST00000340660 A0A096LNT2 108 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 TMEM89A2RUT3 159 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 SH3D21A4FU49 640 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 GABRR3A8MPY1 467 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 DEFB108AA8MXU0 73 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 GAPDHSO14556 408 aaPredicted RBP10.43□□□□□ -0.74
ATXN3-201ENST00000340660 DVL2O14641 736 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 DSCR3O14972 297 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 CTIFO43310 598 aaKnown RBP10.43□□□□□ -0.74
ATXN3-201ENST00000340660 CALUO43852 315 aaPredicted RBP10.43□□□□□ -0.74
ATXN3-201ENST00000340660 SUN1O94901 812 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 LETM1O95202 739 aaPredicted RBP10.43□□□□□ -0.74
ATXN3-201ENST00000340660 SLC25A14O95258 325 aaPredicted RBP10.43□□□□□ -0.74
ATXN3-201ENST00000340660 CLDN7O95471 211 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 AP2B1P63010 937 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 ACTG1P63261 375 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 AMPD3Q01432 767 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 OC90Q02509 493 aaPredicted RBP10.43□□□□□ -0.74
ATXN3-201ENST00000340660 C1orf185Q5T7R7 199 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 ABHD17CQ6PCB6 329 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 KDELC1Q6UW63 502 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 SEM1Q6ZVN7 128 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 DAAM2Q86T65 1068 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 ZNF227Q86WZ6 799 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 UMODL1-AS1Q8N2C9 162 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 C16orf52Q8NHV5 167 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 MIEF2Q96C03 454 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 CFAP57Q96MR6 1250 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 PIGQQ9BRB3 760 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 DEFB127Q9H1M4 99 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 LRRC19Q9H756 370 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 MAU2Q9Y6X3 613 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 SCN2AQ99250 2005 aa10.43□□□□□ -0.74
ATXN3-201ENST00000340660 LOC102723996A0A087X1L8 192 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 PDHA1P08559 390 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 ICAM2P13598 275 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 XRCC4Q13426 336 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 SQLEQ14534 574 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 NKPD1Q17RQ9 610 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 PTPN20Q4JDL3 420 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 FAM120AOSQ5T036 256 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 LRFN4Q6PJG9 635 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 PASD1Q8IV76 773 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 PPM1KQ8N3J5 372 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 HORMAD2Q8N7B1 307 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 TMEM171Q8WVE6 324 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 NAA15Q9BXJ9 866 aaKnown RBP10.42□□□□□ -0.74
ATXN3-201ENST00000340660 FAM83DQ9H4H8 585 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 NOD2Q9HC29 1040 aa10.42□□□□□ -0.74
ATXN3-201ENST00000340660 PVALEFA0A1B0GWK0 134 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 HSPB2A8KAH6 182 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 FAM47E-STBD1D6RA91 191 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 MED7O43513 233 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 LMX1BO60663 402 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms