RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ZC3HC1Q86WB0 502 aaKnown RBP14.64□□□□□ -0.07
PRKN-201ENST00000338468 LURAP1LQ8IV03 231 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 GPR135Q8IZ08 494 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 ZNF655Q8N720 491 aaPredicted RBP14.64□□□□□ -0.07
PRKN-201ENST00000338468 PYROXD1Q8WU10 500 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 SMPDL3AQ92484 453 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 SEC14L1Q92503 715 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 N4BP2L2Q92802 583 aaPredicted RBP14.64□□□□□ -0.07
PRKN-201ENST00000338468 ZUFSPQ96AP4 578 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 LINGO1Q96FE5 620 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 CATSPER2Q96P56 530 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 GBP5Q96PP8 586 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 LRRC1Q9BTT6 524 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 ACAT2Q9BWD1 397 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 GPR87Q9BY21 358 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 RAB17Q9H0T7 212 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 SYNPO2LQ9H987 977 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 INTS7Q9NVH2 962 aaKnown RBP14.64□□□□□ -0.07
PRKN-201ENST00000338468 ZFATQ9P243 1243 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 CORO1CQ9ULV4 474 aaPredicted RBP14.64□□□□□ -0.07
PRKN-201ENST00000338468 PDE10AQ9Y233 779 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 FARSAQ9Y285 508 aaKnown RBP14.64□□□□□ -0.07
PRKN-201ENST00000338468 DOPEY2Q9Y3R5 2298 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 ESYT3A0FGR9 886 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 OR2A25A4D2G3 310 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 SYF2O95926 243 aaKnown RBP14.63□□□□□ -0.07
PRKN-201ENST00000338468 RECKO95980 971 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 KLK3P07288 261 aaPredicted RBP14.63□□□□□ -0.07
PRKN-201ENST00000338468 RAB40ALP0C0E4 278 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 HSD17B2P37059 387 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 RGS4P49798 205 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 IL10RAQ13651 578 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 ERV3-1Q14264 604 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 PHKG1Q16816 387 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 ZXDCQ2QGD7 858 aaPredicted RBP14.63□□□□□ -0.07
PRKN-201ENST00000338468 DEFB109BQ30KR1 87 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 C1orf189Q5VU69 101 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 FAM69BQ5VUD6 431 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 FRMPD2BQ6IN97 320 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 LRRC8EQ6NSJ5 796 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 FAM45BPQ6NSW5 357 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 RHBDD2Q6NTF9 364 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 FBXO42Q6P3S6 717 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 TLDC1Q6P9B6 456 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 MBOAT1Q6ZNC8 495 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 RNF44Q7L0R7 432 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 SLC26A11Q86WA9 606 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 ENDOVQ8N8Q3 282 aaKnown RBP14.63□□□□□ -0.07
PRKN-201ENST00000338468 FAM45AQ8TCE6 357 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 DPH7Q9BTV6 452 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 PHACTR1Q9C0D0 580 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 STOX2Q9P2F5 926 aaPredicted RBP14.63□□□□□ -0.07
PRKN-201ENST00000338468 DHCR7Q9UBM7 475 aaKnown RBP14.63□□□□□ -0.07
PRKN-201ENST00000338468 TAC3Q9UHF0 121 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 IKZF3Q9UKT9 509 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 AP1M2Q9Y6Q5 423 aa14.63□□□□□ -0.07
PRKN-201ENST00000338468 LRRK2Q5S007 2527 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 LOC105369274A0A096LPK9 316 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 LOC102723532A0A0G2JNH3 316 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 TCRBV9S1A1TA0A576 114 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 MED26O95402 600 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 C8GP07360 202 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 HBQ1P09105 142 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 ITGAXP20702 1163 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 CMPK1P30085 196 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 RPA3P35244 121 aaPredicted RBP14.62□□□□□ -0.07
PRKN-201ENST00000338468 TAS2R39P59534 338 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 CAV1Q03135 178 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 PRDX1Q06830 199 aaKnown RBP14.62□□□□□ -0.07
PRKN-201ENST00000338468 PDAP1Q13442 181 aaKnown RBP14.62□□□□□ -0.07
PRKN-201ENST00000338468 PCM1Q15154 2024 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 ICE2Q659A1 982 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 ZNF425Q6IV72 752 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 CYS1Q717R9 158 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 PAQR7Q86WK9 346 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 TMEM151BQ8IW70 566 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 OR4N4Q8N0Y3 316 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 NOA1Q8NC60 698 aaKnown RBP14.62□□□□□ -0.07
PRKN-201ENST00000338468 ZNF592Q92610 1267 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 DPH2Q9BQC3 489 aaPredicted RBP14.62□□□□□ -0.07
PRKN-201ENST00000338468 PLCD4Q9BRC7 762 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 NLNQ9BYT8 704 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 PARVBQ9HBI1 364 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 SLC22A11Q9NSA0 550 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 ZDHHC18Q9NUE0 388 aa14.62□□□□□ -0.07
PRKN-201ENST00000338468 PCSK5Q92824 1860 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 FAM95CA0A1B0GW59 222 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 CDC14CA4D256 554 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 FITM1A5D6W6 292 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 FAM159BA6NKW6 160 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 ZNF839A8K0R7 811 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 SLC16A5O15375 505 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 POLE2P56282 527 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 IL2P60568 153 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 RPS15P62841 145 aaKnown RBP14.61□□□□□ -0.07
PRKN-201ENST00000338468 GUCY2DQ02846 1103 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 TLE1Q04724 770 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 SP140Q13342 867 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 TSTA3Q13630 321 aaPredicted RBP14.61□□□□□ -0.07
PRKN-201ENST00000338468 ZNF460Q14592 562 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms