RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 POM121L1PQ3SYA9 428 aa13.53□□□□□ -0.24
SF1-202ENST00000334944 NXNL2Q5VZ03 156 aa13.53□□□□□ -0.24
SF1-202ENST00000334944 VWCEQ96DN2 955 aa13.53□□□□□ -0.24
SF1-202ENST00000334944 DUS3LQ96G46 650 aaKnown RBP13.53□□□□□ -0.24
SF1-202ENST00000334944 ZNF558Q96NG5 402 aa13.53□□□□□ -0.24
SF1-202ENST00000334944 DSN1Q9H410 356 aa13.53□□□□□ -0.24
SF1-202ENST00000334944 CCL26Q9Y258 94 aa13.53□□□□□ -0.24
SF1-202ENST00000334944 VPS9D1Q9Y2B5 631 aa13.53□□□□□ -0.24
SF1-202ENST00000334944 PCDHA9Q9Y5H5 950 aa13.53□□□□□ -0.24
SF1-202ENST00000334944 TAPBPO15533 448 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 KLK8O60259 260 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 EFEMP2O95967 443 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 ERVK-8P63133 956 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 PPP2R2BQ00005 443 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 LAPTM5Q13571 262 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 ARHGEF7Q14155 803 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 DGUOKQ16854 277 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 HACD2Q6Y1H2 254 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 MILR1Q7Z6M3 343 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 MINDY1Q8N5J2 469 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 GPR26Q8NDV2 337 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 HOPXQ9BPY8 73 aaPredicted RBP13.52□□□□□ -0.24
SF1-202ENST00000334944 ZNF717Q9BY31 904 aaPredicted RBP13.52□□□□□ -0.24
SF1-202ENST00000334944 ACTL8Q9H568 366 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 ABCB8Q9NUT2 735 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 CRNNQ9UBG3 495 aaPredicted RBP13.52□□□□□ -0.24
SF1-202ENST00000334944 ABCD2Q9UBJ2 740 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 PDE10AQ9Y233 779 aa13.52□□□□□ -0.24
SF1-202ENST00000334944 PDZK1P1A8MUH7 402 aa13.52□□□□□ -0.25
SF1-202ENST00000334944 MATN4O95460 622 aa13.52□□□□□ -0.25
SF1-202ENST00000334944 B3GALT4O96024 378 aa13.52□□□□□ -0.25
SF1-202ENST00000334944 PRR35P0CG20 571 aa13.52□□□□□ -0.25
SF1-202ENST00000334944 TUBA3CQ13748 450 aa13.52□□□□□ -0.25
SF1-202ENST00000334944 AASDHQ4L235 1098 aaPredicted RBP13.52□□□□□ -0.25
SF1-202ENST00000334944 INO80DQ53TQ3 878 aaPredicted RBP13.52□□□□□ -0.25
SF1-202ENST00000334944 Q5BKY6 102 aa13.52□□□□□ -0.25
SF1-202ENST00000334944 THAP5Q7Z6K1 395 aa13.52□□□□□ -0.25
SF1-202ENST00000334944 RBM23Q86U06 439 aaKnown RBP13.52□□□□□ -0.25
SF1-202ENST00000334944 OVCA2Q8WZ82 227 aa13.52□□□□□ -0.25
SF1-202ENST00000334944 PYCR2Q96C36 320 aa13.52□□□□□ -0.25
SF1-202ENST00000334944 CCDC177Q9NQR7 707 aaPredicted RBP13.52□□□□□ -0.25
SF1-202ENST00000334944 HCFC1R1Q9NWW0 138 aa13.52□□□□□ -0.25
SF1-202ENST00000334944 WWOXQ9NZC7 414 aa13.52□□□□□ -0.25
SF1-202ENST00000334944 GLYATL1P3A0A0U1RQE8 302 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 UPK1BO75841 260 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 TRBC1P01850 177 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 ZNF7P17097 686 aaPredicted RBP13.51□□□□□ -0.25
SF1-202ENST00000334944 SDE2Q6IQ49 451 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 SDR16C5Q8N3Y7 309 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 ST13P5Q8NFI4 369 aaPredicted RBP13.51□□□□□ -0.25
SF1-202ENST00000334944 CNIH3Q8TBE1 160 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 CNDP2Q96KP4 475 aaKnown RBP13.51□□□□□ -0.25
SF1-202ENST00000334944 VPS35Q96QK1 796 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 C2orf49Q9BVC5 232 aaPredicted RBP13.51□□□□□ -0.25
SF1-202ENST00000334944 MRPL17Q9NRX2 175 aaKnown RBP13.51□□□□□ -0.25
SF1-202ENST00000334944 MAU2Q9Y6X3 613 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 PLXNA4Q9HCM2 1894 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 ARHGAP33O14559 1287 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 ZNF821O75541 412 aaPredicted RBP13.51□□□□□ -0.25
SF1-202ENST00000334944 PRKACGP22612 351 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 CLCN4P51793 760 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 CD47Q08722 323 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 CPSF6Q16630 551 aaKnown RBP eCLIP13.51□□□□□ -0.25
SF1-202ENST00000334944 RETSATQ6NUM9 610 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 SLC39A11Q8N1S5 342 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 TMEM199Q8N511 208 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 KRTCAP2Q8N6L1 136 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 DCAF4L2Q8NA75 395 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 RHOXF1Q8NHV9 184 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 MCFD2Q8NI22 146 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 PMEPA1Q969W9 287 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 OMA1Q96E52 524 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 VMP1Q96GC9 406 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 HHIPL1Q96JK4 782 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 ZNF382Q96SR6 550 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 BTBD2Q9BX70 525 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 CPNE5Q9HCH3 593 aa13.51□□□□□ -0.25
SF1-202ENST00000334944 UPK3BL1B0FP48 263 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 UPK3BL2E5RIL1 263 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 ITGB8P26012 769 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 WEE1P30291 646 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 PPP5CP53041 499 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 HSPA14Q0VDF9 509 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 SKIV2LQ15477 1246 aaKnown RBP13.5□□□□□ -0.25
SF1-202ENST00000334944 ZFP69Q49AA0 526 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 C6orf141Q5SZD1 244 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 PXDC1Q5TGL8 231 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 GDPD3Q7L5L3 318 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 SPATA19Q7Z5L4 167 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 C8orf59Q8N0T1 100 aaPredicted RBP13.5□□□□□ -0.25
SF1-202ENST00000334944 CHDHQ8NE62 594 aaPredicted RBP13.5□□□□□ -0.25
SF1-202ENST00000334944 PNPT1Q8TCS8 783 aaKnown RBP13.5□□□□□ -0.25
SF1-202ENST00000334944 MUL1Q969V5 352 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.5□□□□□ -0.25
SF1-202ENST00000334944 ASIC4Q96FT7 647 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 NODALQ96S42 347 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 TBCDQ9BTW9 1192 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 OR2B2Q9GZK3 357 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 ZDHHC6Q9H6R6 413 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 H7C0S8 307 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms