RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 PPM1DO15297 605 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ZBTB43O43298 467 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 KLF4O43474 513 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ATP2C2O75185 946 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 GPC4O75487 556 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 AP2A1O95782 977 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ZBED1O96006 694 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 NR3C1P04150 777 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 EPHX1P07099 455 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 PRR35P0CG20 571 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 MYF5P13349 255 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 KRT5P13647 590 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 EZRP15311 586 aaKnown RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF12P17014 697 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 CHRNB2P17787 502 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 RHCEP18577 417 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 HIST1H1TP22492 207 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 PTPN6P29350 595 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 CTSOP43234 321 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 CDKN1CP49918 316 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 AFF1P51825 1210 aaKnown RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 IRX1P78414 480 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 IFI35P80217 286 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 TEKQ02763 1124 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 SRSF6Q13247 344 aaKnown RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 PDCD1Q15116 288 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 KNOP1Q1ED39 458 aaKnown RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 HKDC1Q2TB90 917 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ZSCAN23Q3MJ62 389 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 PIGGQ5H8A4 983 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 FAM209BQ5JX69 171 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 CDPF1Q6NVV7 123 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 HIBCHQ6NVY1 386 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 SLC30A6Q6NXT4 461 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 CYHR1Q6ZMK1 362 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 TTLL10Q6ZVT0 673 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 PLEKHM3Q6ZWE6 761 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 CENPQQ7L2Z9 268 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 SLC22A16Q86VW1 577 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 TTC29Q8NA56 475 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 OR7D4Q8NG98 312 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 OR2L8Q8NGY9 312 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 FEZF2Q8TBJ5 459 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF418Q8TF45 676 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 MTBPQ96DY7 904 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 SCRN2Q96FV2 425 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF830Q96NB3 372 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 SLC22A12Q96S37 553 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 FAM110AQ9BQ89 295 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 SH2D3AQ9BRG2 576 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 KATNB1Q9BVA0 655 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 SELENOOQ9BVL4 669 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 CARD6Q9BX69 1037 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 PCBD2Q9H0N5 130 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 MRPL46Q9H2W6 279 aaKnown RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 DEF6Q9H4E7 631 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 PARVGQ9HBI0 331 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 Q9UFV3 132 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 MED16Q9Y2X0 877 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 PCDHB4Q9Y5E5 795 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 GMPPBQ9Y5P6 360 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 CORINQ9Y5Q5 1042 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 CACNG2Q9Y698 323 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 PKD1P98161 4303 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 UTP20O75691 2785 aaKnown RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 SAGE2PA6NJ88 616 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 CCT8L1PA6NM43 557 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 CAPN14A8MX76 684 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 NT5C1B-RDH14C9J2C7 533 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 E7EQ34 232 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ACOT7O00154 380 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 RNF103O00237 685 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 PSMA7O14818 248 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 NKX2-8O15522 239 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 MED7O43513 233 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ASNA1O43681 348 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ENTPD5O75356 428 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ZWINTO95229 277 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 NSA2O95478 260 aaKnown RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 IGF2P01344 180 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 RPLP1P05386 114 aaKnown RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 IRF1P10914 325 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ANPEPP15144 967 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 PKLRP30613 574 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 APOBEC3AP31941 199 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 HSPA4P34932 840 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 KRT2P35908 639 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 GNL1P36915 607 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 NR4A2P43354 598 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 CLK1P49759 484 aaKnown RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 B3GALT5-AS1P59052 145 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ACVR1Q04771 509 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 PCGF3Q3KNV8 242 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 EMC4Q5J8M3 183 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 IRAK1BP1Q5VVH5 260 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 OLFML2AQ68BL7 652 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ANKS6Q68DC2 871 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ASPHD2Q6ICH7 369 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 B3GNT8Q7Z7M8 397 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms