RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 XKP51811 444 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 ZACNQ401N2 412 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 FSTL4Q6MZW2 842 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 GALNT10Q86SR1 603 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 APLFQ8IW19 511 aaPredicted RBP10.33□□□□□ -0.76
CLN8-201ENST00000331222 FUKQ8N0W3 1084 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 OXR1Q8N573 874 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 ZBED6CLQ96FA7 236 aaPredicted RBP10.33□□□□□ -0.76
CLN8-201ENST00000331222 SLC5A7Q9GZV3 580 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 ZNF700Q9H0M5 742 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 MKKSQ9NPJ1 570 aaPredicted RBP10.33□□□□□ -0.76
CLN8-201ENST00000331222 PLOD2O00469 737 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 SOX14O95416 240 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 GGT5P36269 586 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 KCNC4Q03721 635 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 RBM48Q5RL73 367 aaKnown RBP10.33□□□□□ -0.76
CLN8-201ENST00000331222 CRTC1Q6UUV9 634 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 HOPXQ9BPY8 73 aaPredicted RBP10.33□□□□□ -0.76
CLN8-201ENST00000331222 RHCGQ9UBD6 479 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 FRMPD1Q5SYB0 1578 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 FABP12A6NFH5 140 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 WNT9AO14904 365 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 MAFKO60675 156 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 PRAMEF12O95522 483 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 SLC1A2P43004 574 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 XIAPP98170 497 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 KLF10Q13118 480 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 RFTN2Q52LD8 501 aaPredicted RBP10.33□□□□□ -0.76
CLN8-201ENST00000331222 CRB2Q5IJ48 1285 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 ZNF311Q5JNZ3 666 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 RALGPS1Q5JS13 557 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 TRIM74Q86UV6 250 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 PLD5Q8N7P1 536 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 PHC3Q8NDX5 983 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 SLC7A6OSQ96CW6 309 aaPredicted RBP10.33□□□□□ -0.76
CLN8-201ENST00000331222 DNAJC19Q96DA6 116 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 COL21A1Q96P44 957 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 MYH14Q7Z406 1995 aaKnown RBP10.33□□□□□ -0.76
CLN8-201ENST00000331222 A0A1B0GV50 99 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 CXCR6O00574 342 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 POLR2CP19387 275 aaPredicted RBP10.33□□□□□ -0.76
CLN8-201ENST00000331222 S100A2P29034 98 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 MAGEA11P43364 429 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 CHRNA6Q15825 494 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 STRADAQ7RTN6 431 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 SDR16C5Q8N3Y7 309 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 TMEM68Q96MH6 324 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 BCO2Q9BYV7 579 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 L2HGDHQ9H9P8 463 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 TMEM165Q9HC07 324 aa10.33□□□□□ -0.76
CLN8-201ENST00000331222 TCRBV21S2A2A0A5A6 115 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 CLCN4P51793 760 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 ZNF41P51814 821 aaPredicted RBP10.32□□□□□ -0.76
CLN8-201ENST00000331222 GBX2P52951 348 aaPredicted RBP10.32□□□□□ -0.76
CLN8-201ENST00000331222 MEF2AQ02078 507 aaPredicted RBP10.32□□□□□ -0.76
CLN8-201ENST00000331222 BICRALQ6AI39 1079 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 INO80EQ8NBZ0 244 aaPredicted RBP10.32□□□□□ -0.76
CLN8-201ENST00000331222 OR52E4Q8NGH9 312 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 NFKBIDQ8NI38 313 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 NMUR2Q9GZQ4 415 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 SDHAF3Q9NRP4 125 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 EURLQ9NYK6 297 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 NUDT4Q9NZJ9 180 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 ZNF221Q9UK13 617 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 FZD10Q9ULW2 581 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 AIREO43918 545 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 CLDN7O95471 211 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 RHOQP17081 205 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 CD40LGP29965 261 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 RPS9P46781 194 aaKnown RBP10.32□□□□□ -0.76
CLN8-201ENST00000331222 CDH11P55287 796 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 SLC26A5P58743 744 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 AP1S1P61966 158 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 CD83Q01151 205 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 MBLAC2Q68D91 279 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 ADNP2Q6IQ32 1131 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 MON1BQ7L1V2 547 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 C1orf127Q8N9H9 656 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 EHD1Q9H4M9 534 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 TRPV4Q9HBA0 871 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 UPB1Q9UBR1 384 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 COL3A1P02461 1466 aaPredicted RBP10.32□□□□□ -0.76
CLN8-201ENST00000331222 INPPL1O15357 1258 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 AP2A1O95782 977 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 FHP07954 510 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 THOC7Q6I9Y2 204 aaKnown RBP10.32□□□□□ -0.76
CLN8-201ENST00000331222 ARL9Q6T311 187 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 TREML1Q86YW5 311 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 CBR4Q8N4T8 237 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 ACMSDQ8TDX5 336 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 TMEM168Q9H0V1 697 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 LRRC19Q9H756 370 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 CCNB1IP1Q9NPC3 277 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 VSTM5A8MXK1 200 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 SOX1O00570 391 aaPredicted RBP10.32□□□□□ -0.76
CLN8-201ENST00000331222 DUSP11O75319 330 aaKnown RBP10.32□□□□□ -0.76
CLN8-201ENST00000331222 GRIK2Q13002 908 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 LRRC37A5PQ49AS3 106 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 RAB43Q86YS6 212 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 PQLC1Q8N2U9 271 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms