RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 ARHGEF3Q9NR81 526 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 FARSBQ9NSD9 589 aaKnown RBP11.13□□□□□ -0.63
COL4A5-201ENST00000328300 DNMT3AQ9Y6K1 912 aaPredicted RBP11.13□□□□□ -0.63
COL4A5-201ENST00000328300 SNPHO15079 494 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 FAM189A1O60320 539 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 CCKBRP32239 447 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 FOXN2P32314 431 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 ZCCHC10Q8TBK6 192 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 HCAR2Q8TDS4 363 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 MSANTD3Q96H12 275 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 PCDHGB1Q9Y5G3 927 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 RGS10O43665 173 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 TOP3BO95985 862 aaKnown RBP11.12□□□□□ -0.63
COL4A5-201ENST00000328300 ABHD18Q0P651 414 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 MYBPC3Q14896 1274 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 TGFBIQ15582 683 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 VWA5B1Q5TIE3 1220 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 EMC10Q5UCC4 262 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 ZCCHC12Q6PEW1 402 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 GPR150Q8NGU9 434 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 GEMIN6Q8WXD5 167 aaKnown RBP11.12□□□□□ -0.63
COL4A5-201ENST00000328300 PTPN18Q99952 460 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 NDC1Q9BTX1 674 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 CDH7Q9ULB5 785 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 N4BP2Q86UW6 1770 aaPredicted RBP11.12□□□□□ -0.63
COL4A5-201ENST00000328300 A0A0D9SEW6 157 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 AKAP8O43823 692 aaKnown RBP11.12□□□□□ -0.63
COL4A5-201ENST00000328300 HMGN1P05114 100 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 MAGEA6P43360 314 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 GSSP48637 474 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 MASP1P48740 699 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 GALNT1Q10472 559 aaPredicted RBP11.12□□□□□ -0.63
COL4A5-201ENST00000328300 HSPB3Q12988 150 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 SCARB2Q14108 478 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 MINDY4Q4G0A6 757 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 HTR3DQ70Z44 454 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 CGREF1Q99674 301 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 AKTIPQ9H8T0 292 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 MKKSQ9NPJ1 570 aaPredicted RBP11.12□□□□□ -0.63
COL4A5-201ENST00000328300 EQTNQ9NQ60 294 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 SIRPGQ9P1W8 387 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 TIPRLO75663 272 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 DRD1P21728 446 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 GSTM2P28161 218 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 NTSR1P30989 418 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 RGS21Q2M5E4 152 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 DGAT2Q96PD7 388 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 EBPLQ9BY08 206 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 RAPGEFL1Q9UHV5 662 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 TFPIP10646 304 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 FDXRP22570 491 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 GRK6P43250 576 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 KLHL22Q53GT1 634 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 KLHL26Q53HC5 615 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 SWT1Q5T5J6 900 aaKnown RBP11.12□□□□□ -0.63
COL4A5-201ENST00000328300 MANEALQ5VSG8 457 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 ALKAL1Q6UXT8 129 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 GALNT7Q86SF2 657 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 RBM12BQ8IXT5 1001 aaKnown RBP11.12□□□□□ -0.63
COL4A5-201ENST00000328300 OR4F6Q8NGB9 312 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 ZDHHC12Q96GR4 267 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 MGME1Q9BQP7 344 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 SPIN1Q9Y657 262 aaPredicted RBP11.12□□□□□ -0.63
COL4A5-201ENST00000328300 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.12□□□□□ -0.63
COL4A5-201ENST00000328300 FAM214AQ32MH5 1076 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 ZIK1Q3SY52 487 aaPredicted RBP11.12□□□□□ -0.63
COL4A5-201ENST00000328300 MSS51Q4VC12 460 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 EPYCQ99645 322 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 HERPUD2Q9BSE4 406 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 TRIM39Q9HCM9 518 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 SERINC1Q9NRX5 453 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 TAC3Q9UHF0 121 aa11.12□□□□□ -0.63
COL4A5-201ENST00000328300 TRIM3O75382 744 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 ACADVLP49748 655 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 NDUFA5Q16718 116 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 SLC9B1Q4ZJI4 515 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 KLHL24Q6TFL4 600 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 ZDHHC21Q8IVQ6 265 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 OR10A6Q8NH74 314 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 FAM210AQ96ND0 272 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 CADM1Q9BY67 442 aaKnown RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 CKLFQ9UBR5 152 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 AK5Q9Y6K8 562 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 A0A1W2PP18 115 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 SAGP10523 405 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 CD1DP15813 335 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 RALGDSQ12967 914 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 TOR1AIP1Q5JTV8 583 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 KLHL17Q6TDP4 642 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 DPY19L3Q6ZPD9 716 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 UBASH3BQ8TF42 649 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 PRRG4Q9BZD6 226 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 DENND2DQ9H6A0 471 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 FANCFQ9NPI8 374 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 SERTAD3Q9UJW9 196 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 SIPA1L3O60292 1781 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 GIMD1P0DJR0 217 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 ARFIP1P53367 373 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 PLA2G16P53816 162 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 DSC3Q14574 896 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms