RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 C5orf22Q49AR2 442 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 LCN1P1Q5VSP4 162 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 ZNF433Q8N7K0 673 aaPredicted RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 RHEBL1Q8TAI7 183 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 WFIKKN2Q8TEU8 576 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 KBTBD7Q8WVZ9 684 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 GEMIN6Q8WXD5 167 aaKnown RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 COL21A1Q96P44 957 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 CD244Q9BZW8 370 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 TBC1D17Q9HA65 648 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 PCDHGA4Q9Y5G9 962 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 A0A0G2JN53 185 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 RASGRP1O95267 797 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 ZNF24P17028 368 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 GJA1P17302 382 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 TP53INP2Q8IXH6 220 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 PEX5LQ8IYB4 626 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 CMTM8Q8IZV2 173 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 TRPV1Q8NER1 839 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 C9orf43Q8TAL5 461 aaPredicted RBP13.43□□□□□ -0.26
SPAST-201ENST00000315285 TMCO6Q96DC7 493 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 CCM2Q9BSQ5 444 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 MEAF6Q9HAF1 191 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 TPT1P8Q9HAU6 139 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 MAGEE1Q9HCI5 957 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 SNX7Q9UNH6 387 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 PRORSD1PA6NEY8 169 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 PIK3CBP42338 1070 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 ARSFP54793 590 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 CBX3Q13185 183 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 KLHL22Q53GT1 634 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 NPWQ8N729 165 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 SCAIQ8N9R8 606 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 SNX33Q8WV41 574 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 AURKBQ96GD4 344 aaPredicted RBP13.43□□□□□ -0.26
SPAST-201ENST00000315285 MCCC1Q96RQ3 725 aaPredicted RBP13.43□□□□□ -0.26
SPAST-201ENST00000315285 TOR3AQ9H497 397 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 TRPV5Q9NQA5 729 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 FAM120CQ9NX05 1096 aaKnown RBP13.43□□□□□ -0.26
SPAST-201ENST00000315285 POFUT2Q9Y2G5 429 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.43□□□□□ -0.26
SPAST-201ENST00000315285 DIRAS1O95057 198 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 S1PR4O95977 384 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 PRKACGP22612 351 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 RYKP34925 604 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 ILF3Q12906 894 aaKnown RBP eCLIP13.43□□□□□ -0.26
SPAST-201ENST00000315285 GRB7Q14451 532 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 PRAMEF14Q5SWL7 426 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 PRAMEF13Q5VWM6 474 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 NANOGNBQ7Z5D8 188 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 PEG10Q86TG7 708 aaKnown RBP13.43□□□□□ -0.26
SPAST-201ENST00000315285 TMC8Q8IU68 726 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.43□□□□□ -0.26
SPAST-201ENST00000315285 PSKH2Q96QS6 385 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 KCNN2Q9H2S1 579 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 DHRS7Q9Y394 339 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 DOT1LQ8TEK3 1739 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 GPR32O75388 356 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 IGFBP4P22692 258 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 HOXA11P31270 313 aaPredicted RBP13.43□□□□□ -0.26
SPAST-201ENST00000315285 UNC50Q53HI1 259 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 ZNF773Q6PK81 442 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 TMEM130Q8N3G9 435 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 ZNF461Q8TAF7 563 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 IL4I1Q96RQ9 567 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 PDCD10Q9BUL8 212 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 DCSTAMPQ9H295 470 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 IL36AQ9UHA7 158 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 MRTO4Q9UKD2 239 aaKnown RBP13.43□□□□□ -0.26
SPAST-201ENST00000315285 CFL2Q9Y281 166 aa13.43□□□□□ -0.26
SPAST-201ENST00000315285 SCAMP1O15126 338 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 OR1I1O60431 355 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 VIPR1P32241 457 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 NCBP2P52298 156 aaKnown RBP eCLIP13.42□□□□□ -0.26
SPAST-201ENST00000315285 TPTEP56180 551 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 TOMM20Q15388 145 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 MEP1AQ16819 746 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 CRB2Q5IJ48 1285 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 VITQ6UXI7 678 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 ZNF280BQ86YH2 543 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 SAMD14Q8IZD0 417 aaPredicted RBP13.42□□□□□ -0.26
SPAST-201ENST00000315285 UFD1Q92890 307 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 HSH2DQ96JZ2 352 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 IL12RB2Q99665 862 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 TMEM9Q9P0T7 183 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 M0QX08 132 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 SLC31A1O15431 190 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 HCN1O60741 890 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 CCR8P51685 355 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 ERVK-21P61565 698 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 MYBPC3Q14896 1274 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 SMARCD3Q6STE5 483 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 JAZF1Q86VZ6 243 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.42□□□□□ -0.26
SPAST-201ENST00000315285 SLC45A3Q96JT2 553 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 TRBC2A0A5B9 178 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 CPSF4LA6NMK7 179 aaKnown RBP13.42□□□□□ -0.26
SPAST-201ENST00000315285 KLK1P06870 262 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 ZNF30P17039 623 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 HSD17B2P37059 387 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms