RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 SNX20Q7Z614 316 aa10.86□□□□□ -0.67
PTPN7-201ENST00000309017 CPPED1Q9BRF8 314 aaPredicted RBP10.86□□□□□ -0.67
PTPN7-201ENST00000309017 KCNH6Q9H252 994 aa10.86□□□□□ -0.67
PTPN7-201ENST00000309017 SCML2Q9UQR0 700 aa10.86□□□□□ -0.67
PTPN7-201ENST00000309017 DHRS7Q9Y394 339 aa10.86□□□□□ -0.67
PTPN7-201ENST00000309017 PCDHGB6Q9Y5F9 930 aa10.86□□□□□ -0.67
PTPN7-201ENST00000309017 ZSWIM8A7E2V4 1837 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 ANKRD34BA5PLL1 514 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 CLIC1O00299 241 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 FPGTO14772 594 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 TLL1O43897 1013 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 GUCY1B2O75343 617 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 MAPKAPK2P49137 400 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 PRSS36Q5K4E3 855 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 KDM4DQ6B0I6 523 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 TUBA3EQ6PEY2 450 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 C16orf59Q7L2K0 433 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 ZNF467Q7Z7K2 595 aaPredicted RBP10.85□□□□□ -0.67
PTPN7-201ENST00000309017 KLHDC9Q8NEP7 349 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 ZNF675Q8TD23 568 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 GTF3C2Q8WUA4 911 aaPredicted RBP10.85□□□□□ -0.67
PTPN7-201ENST00000309017 NELL1Q92832 810 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 MYEOVQ96EZ4 313 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 ASB8Q9H765 288 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 IL1RAPQ9NPH3 570 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 CRLS1Q9UJA2 301 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 ANKRD66B4E2M5 251 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 SCAMP3O14828 347 aaKnown RBP10.85□□□□□ -0.67
PTPN7-201ENST00000309017 STSP08842 583 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 ENGP17813 658 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 DGKAP23743 735 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 THPOP40225 353 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 SLC15A1P46059 708 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 NFE2Q16621 373 aaPredicted RBP10.85□□□□□ -0.67
PTPN7-201ENST00000309017 ZNF544Q6NX49 715 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 TRAF7Q6Q0C0 670 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 VASH1Q7L8A9 365 aaPredicted RBP10.85□□□□□ -0.67
PTPN7-201ENST00000309017 TCAIMQ8N3R3 496 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 TTC9BQ8N6N2 239 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 LILRB4Q8NHJ6 448 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 ADAM2Q99965 735 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 TTPALQ9BTX7 342 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 ARL15Q9NXU5 204 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 GPR83Q9NYM4 423 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 PCDHGA3Q9Y5H0 932 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 NOTOA8MTQ0 251 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 WNT9AO14904 365 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 HAT1O14929 419 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 STK16O75716 305 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 POU1F1P28069 291 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 CA8P35219 290 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 KIAA0040Q15053 153 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 TAB1Q15750 504 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 SBSNQ6UWP8 590 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 SERPINA9Q86WD7 417 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 SYT12Q8IV01 421 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 BHMTQ93088 406 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 EGLN2Q96KS0 407 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 CDK5RAP1Q96SZ6 601 aaKnown RBP10.85□□□□□ -0.67
PTPN7-201ENST00000309017 YME1L1Q96TA2 773 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 RERGLQ9H628 205 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 TRIM39Q9HCM9 518 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 FAM8A1Q9UBU6 413 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 RIMKLBQ9ULI2 386 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 BOLA1Q9Y3E2 137 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 PCDHB5Q9Y5E4 795 aa10.85□□□□□ -0.67
PTPN7-201ENST00000309017 ZFP37Q9Y6Q3 630 aaPredicted RBP10.85□□□□□ -0.67
PTPN7-201ENST00000309017 CLDN9O95484 217 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 POU2F1P14859 743 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 HOXB6P17509 224 aaKnown RBP10.84□□□□□ -0.67
PTPN7-201ENST00000309017 KDELR2P33947 212 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 TGFBR2P37173 567 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 IFITM2Q01629 132 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 FADDQ13158 208 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 MADCAM1Q13477 382 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 GNASQ5JWF2 1037 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 GDPD3Q7L5L3 318 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 OR6K2Q8NGY2 324 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 PSKH2Q96QS6 385 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 BOCQ9BWV1 1114 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 CD244Q9BZW8 370 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 CCSER2Q9H7U1 834 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 ADPRHL2Q9NX46 363 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 ELOVL2Q9NXB9 296 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.84□□□□□ -0.67
PTPN7-201ENST00000309017 EFCAB10A6NFE3 127 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 M0R129 80 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 PRAMEF1O95521 474 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 ABCB1P08183 1280 aaPredicted RBP10.84□□□□□ -0.67
PTPN7-201ENST00000309017 IRF1P10914 325 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 COX7A2P14406 83 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 TACR1P25103 407 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 RRM2P31350 389 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 ZNF177Q13360 481 aaPredicted RBP10.84□□□□□ -0.67
PTPN7-201ENST00000309017 FAM171A1Q5VUB5 890 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 AGAP6Q5VW22 663 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 ENTHD1Q8IYW4 607 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 AGAP4Q96P64 663 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 ZNF556Q9HAH1 456 aa10.84□□□□□ -0.67
PTPN7-201ENST00000309017 GIMAP4Q9NUV9 329 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms