RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 RAD51AP1Q96B01 352 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 LRRC58Q96CX6 371 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 FCRL1Q96LA6 429 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 S100A14Q9HCY8 104 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 TM7SF3Q9NS93 570 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 GID8Q9NWU2 228 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 ADA2Q9NZK5 511 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 STOML1Q9UBI4 398 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 CD300AQ9UGN4 299 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 LEF1Q9UJU2 399 aaPredicted RBP11.5□□□□□ -0.57
TRIM40-205ENST00000307859 ASF1AQ9Y294 204 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 KCNE2Q9Y6J6 123 aa11.5□□□□□ -0.57
TRIM40-205ENST00000307859 SNRNP200O75643 2136 aaKnown RBP11.5□□□□□ -0.57
TRIM40-205ENST00000307859 TBC1D3DA0A087WVF3 549 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 TBC1D3IA0A087WXS9 549 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 TBC1D3EA0A087X179 549 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 TBC1D3KA0A087X1G2 549 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 TBC1D3FA6NER0 549 aaPredicted RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 PRR19A6NJB7 356 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 C10orf142B7Z368 130 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 TBC1D3LB9A6J9 549 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 MAP3K7O43318 606 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 SEC22BO75396 215 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 BCAS2O75934 225 aaPredicted RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 FUCA1P04066 466 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 RPN2P04844 631 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 CEACAM5P06731 702 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 HOXC4P09017 264 aaPredicted RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 TBC1D3HP0C7X1 549 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 HSD3B1P14060 373 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 KELP23276 732 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 HSD3B2P26439 372 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 VARSP26640 1264 aaKnown RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 NEK2P51955 445 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 PNLIPRP1P54315 467 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 AP2B1P63010 937 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 CCDC6Q16204 474 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 CACHD1Q5VU97 1274 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 TBC1D3GQ6DHY5 549 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 CAPRIN2Q6IMN6 1127 aaKnown RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 TBC1D3CQ6IPX1 549 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 TRIM69Q86WT6 500 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 TBC1D3Q8IZP1 549 aaPredicted RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 LIX1Q8N485 282 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 DPP10Q8N608 796 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 OR5AR1Q8NGP9 310 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 OR5K2Q8NHB8 316 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 TFGQ92734 400 aaPredicted RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 NEIL2Q969S2 332 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 VPS33AQ96AX1 596 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 MTFMTQ96DP5 389 aaKnown RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 ASB9Q96DX5 294 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 SCARF2Q96GP6 870 aaPredicted RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 APOOQ9BUR5 198 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 EHD1Q9H4M9 534 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 BCAP29Q9UHQ4 241 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 ANGPTL2Q9UKU9 493 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 ACSL5Q9ULC5 683 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 TMED5Q9Y3A6 229 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 PKD1L2Q7Z442 2459 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 PRORSD1PA6NEY8 169 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 KCNJ13O60928 360 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 ANP32DO95626 131 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 NPPAP01160 153 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 SLC35G4P0C7Q5 338 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 ACADMP11310 421 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 SRFP11831 508 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 BCKDHAP12694 445 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 ANPEPP15144 967 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 NPPBP16860 134 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 GABRG2P18507 467 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 MAT2AP31153 395 aaKnown RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 PTDSS1P48651 473 aaKnown RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 SLC7A2P52569 658 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 KIAA1024LP59773 190 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 MS4A2Q01362 244 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 TAP2Q03519 686 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 FLOT2Q14254 428 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 PTGR1Q14914 329 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 ARHGAP19Q14CB8 494 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 ANGPT1Q15389 498 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 SPATS1Q496A3 300 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 TIGD2Q4W5G0 525 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 PYCR3Q53H96 274 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 PAGE3Q5JUK9 113 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 SUSD1Q6UWL2 747 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 KIAA1324Q6UXG2 1013 aaKnown RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 FAM9CQ8IZT9 166 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 RNF148Q8N7C7 305 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 GLB1L3Q8NCI6 653 aaPredicted RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 SLC26A7Q8TE54 656 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 METTL2AQ96IZ6 378 aaKnown RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 SLC39A3Q9BRY0 314 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 BTBD1Q9H0C5 482 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 BRF2Q9HAW0 419 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 FZD3Q9NPG1 666 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 CD93Q9NPY3 652 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 CCDC177Q9NQR7 707 aaPredicted RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 SPATA6Q9NWH7 488 aaPredicted RBP11.49□□□□□ -0.57
TRIM40-205ENST00000307859 DYRK1BQ9Y463 629 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms