RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 PRSS23O95084 383 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 ACPPP15309 386 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 ZNF7P17097 686 aaPredicted RBP14.19□□□□□ -0.14
PTPN9-201ENST00000306726 CTSKP43235 329 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 INPP1P49441 399 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 GSTM4Q03013 218 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 CREMQ03060 361 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 EMX2Q04743 252 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 SUSD1Q6UWL2 747 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 TMCO2Q7Z6W1 182 aaPredicted RBP14.19□□□□□ -0.14
PTPN9-201ENST00000306726 ZFAND4Q86XD8 727 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 DCP2Q8IU60 420 aaKnown RBP14.19□□□□□ -0.14
PTPN9-201ENST00000306726 PHOSPHO2Q8TCD6 241 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 PTCD2Q8WV60 388 aaKnown RBP14.19□□□□□ -0.14
PTPN9-201ENST00000306726 TRUB1Q8WWH5 349 aaKnown RBP14.19□□□□□ -0.14
PTPN9-201ENST00000306726 TP53INP1Q96A56 240 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 PTBP2Q9UKA9 531 aaKnown RBP14.19□□□□□ -0.14
PTPN9-201ENST00000306726 FAM32AQ9Y421 112 aaKnown RBP14.19□□□□□ -0.14
PTPN9-201ENST00000306726 FAM227AF5H4B4 570 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 AQP9O43315 295 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 KRT6AP02538 564 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 KRT6BP04259 564 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 CKMP06732 381 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 BCKDHAP12694 445 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 TYMPP19971 482 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 KRT6CP48668 564 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 SERINC3Q13530 473 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 TIGD6Q17RP2 521 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 TYW3Q6IPR3 259 aaKnown RBP14.18□□□□□ -0.14
PTPN9-201ENST00000306726 TCAIMQ8N3R3 496 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 PACRGLQ8N7B6 248 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 L3HYPDHQ96EM0 354 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 ART5Q96L15 291 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 DEPDC7Q96QD5 511 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 CORO1BQ9BR76 489 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 ARIH1Q9Y4X5 557 aaPredicted RBP14.18□□□□□ -0.14
PTPN9-201ENST00000306726 PRSS21Q9Y6M0 314 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.18□□□□□ -0.14
PTPN9-201ENST00000306726 MGAT4DA6NG13 374 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 ANKRD66B4E2M5 251 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 EEDO75530 441 aaKnown RBP14.18□□□□□ -0.14
PTPN9-201ENST00000306726 RPS14P62263 151 aaKnown RBP14.18□□□□□ -0.14
PTPN9-201ENST00000306726 CD83Q01151 205 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 HKDC1Q2TB90 917 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 ATL1Q8WXF7 558 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 TRIM43Q96BQ3 446 aaPredicted RBP14.18□□□□□ -0.14
PTPN9-201ENST00000306726 SCLYQ96I15 445 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 MRGBPQ9NV56 204 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 C1orf109Q9NX04 203 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 CTDSP2O14595 271 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 STK16O75716 305 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 FGBP02675 491 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 PABPC1P11940 636 aaKnown RBP14.18□□□□□ -0.14
PTPN9-201ENST00000306726 RRM2P31350 389 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 PCBP2Q15366 365 aaKnown RBP eCLIP14.18□□□□□ -0.149e-7■■□□□ 11.4
PTPN9-201ENST00000306726 DGKKQ5KSL6 1271 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.18□□□□□ -0.14
PTPN9-201ENST00000306726 XAF1Q6GPH4 301 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 DESI1Q6ICB0 168 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 ZNF605Q86T29 641 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 TSPAN33Q86UF1 283 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 C7orf61Q8IZ16 206 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 ZNF420Q8TAQ5 688 aaPredicted RBP14.18□□□□□ -0.14
PTPN9-201ENST00000306726 PPP3R2Q96LZ3 170 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 TCF25Q9BQ70 676 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 GPR62Q9BZJ7 368 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 BPTFQ12830 3046 aa14.18□□□□□ -0.14
PTPN9-201ENST00000306726 KIAA0100Q14667 2235 aaKnown RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 PRRG1O14668 218 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 VPS4BO75351 444 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 EPN2O95208 641 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 ITGALP20701 1170 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 ATP5C1P36542 298 aaKnown RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 RPP38P78345 283 aaKnown RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 XKR6Q5GH73 641 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 EFL1Q7Z2Z2 1120 aaKnown RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 SPRED1Q7Z699 444 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 SLC34A3Q8N130 599 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 TERB1Q8NA31 727 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 CD200R1Q8TD46 325 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 HSH2DQ96JZ2 352 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 SMG9Q9H0W8 520 aaKnown RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 FBXO44Q9H4M3 255 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 LTBP2Q14767 1821 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 TYW5A2RUC4 315 aaKnown RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 TMEM189-UBE2V1I3L0A0 370 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 CLIC1O00299 241 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 UMPSP11172 480 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 TMBIM6P55061 237 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 ACSM2AQ08AH3 577 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 ELAVL2Q12926 359 aaKnown RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 CHRNA6Q15825 494 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 DPY19L1Q2PZI1 675 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 ACSM2BQ68CK6 577 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 UBE2R2Q712K3 238 aaPredicted RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 BHLHA9Q7RTU4 235 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 VPS35Q96QK1 796 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 ZNF556Q9HAH1 456 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 ADPRHL2Q9NX46 363 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 TBC1D14Q9P2M4 693 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms