RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 PYCR3Q53H96 274 aa11.03□□□□□ -0.64
SCG2-201ENST00000305409 THEMIS2Q5TEJ8 643 aa11.03□□□□□ -0.64
SCG2-201ENST00000305409 AGBL4Q5VU57 503 aa11.03□□□□□ -0.64
SCG2-201ENST00000305409 LCN8Q6JVE9 175 aa11.03□□□□□ -0.64
SCG2-201ENST00000305409 METTL2BQ6P1Q9 378 aaKnown RBP11.03□□□□□ -0.64
SCG2-201ENST00000305409 C11orf96Q7Z7L8 435 aa11.03□□□□□ -0.64
SCG2-201ENST00000305409 CLEC4FQ8N1N0 589 aa11.03□□□□□ -0.64
SCG2-201ENST00000305409 FAM86B1Q8N7N1 296 aa11.03□□□□□ -0.64
SCG2-201ENST00000305409 NUP210Q8TEM1 1887 aaPredicted RBP11.03□□□□□ -0.64
SCG2-201ENST00000305409 ZUFSPQ96AP4 578 aa11.03□□□□□ -0.64
SCG2-201ENST00000305409 MRPL38Q96DV4 380 aaKnown RBP11.03□□□□□ -0.64
SCG2-201ENST00000305409 HIC2Q96JB3 615 aa11.03□□□□□ -0.64
SCG2-201ENST00000305409 ZNF583Q96ND8 569 aa11.03□□□□□ -0.64
SCG2-201ENST00000305409 CXorf56Q9H5V9 222 aa11.03□□□□□ -0.64
SCG2-201ENST00000305409 CLEC1BQ9P126 229 aa11.03□□□□□ -0.64
SCG2-201ENST00000305409 UTS2RQ9UKP6 389 aa11.03□□□□□ -0.64
SCG2-201ENST00000305409 SPEGQ15772 3267 aa11.02□□□□□ -0.64
SCG2-201ENST00000305409 A0A1B0GTW7 788 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 ARNTLO00327 626 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 QSOX1O00391 747 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 APODP05090 189 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 PSMA4P25789 261 aaKnown RBP11.02□□□□□ -0.65
SCG2-201ENST00000305409 S100A3P33764 101 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 FGL2Q14314 439 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 GGTA1PQ4G0N0 100 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 TMEM52BQ4KMG9 183 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 PNCKQ6P2M8 343 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 IYDQ6PHW0 289 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 ZBTB49Q6ZSB9 765 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 DSG4Q86SJ6 1040 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 HUS1BQ8NHY5 278 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 MIEF2Q96C03 454 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 RNF145Q96MT1 663 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 TRMT61BQ9BVS5 477 aaKnown RBP11.02□□□□□ -0.65
SCG2-201ENST00000305409 CAAP1Q9H8G2 361 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 BATF3Q9NR55 127 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 DZANK1Q9NVP4 752 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 MOSPD1Q9UJG1 213 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 TCRBV5S2A0A599 114 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 A6NHS1 94 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 FUCA1P04066 466 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 LINGO3P0C6S8 592 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 MYCLP1P12525 358 aaPredicted RBP11.02□□□□□ -0.65
SCG2-201ENST00000305409 NPPBP16860 134 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 EEFSECP57772 596 aaKnown RBP11.02□□□□□ -0.65
SCG2-201ENST00000305409 RPS13P62277 151 aaKnown RBP11.02□□□□□ -0.65
SCG2-201ENST00000305409 SLC14A1Q13336 389 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 ITPRIPL2Q3MIP1 535 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 TMEM31Q5JXX7 168 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 ERMP1Q7Z2K6 904 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 FAM124AQ86V42 546 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 SYT12Q8IV01 421 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 C1orf52Q8N6N3 182 aaKnown RBP11.02□□□□□ -0.65
SCG2-201ENST00000305409 OR7G3Q8NG95 312 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 FBXO30Q8TB52 745 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 WDR20Q8TBZ3 569 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 PNPT1Q8TCS8 783 aaKnown RBP11.02□□□□□ -0.65
SCG2-201ENST00000305409 CMTM7Q96FZ5 175 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 EFHD1Q9BUP0 239 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 ZDHHC5Q9C0B5 715 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 ZCCHC2Q9C0B9 1178 aaKnown RBP11.02□□□□□ -0.65
SCG2-201ENST00000305409 CARS2Q9HA77 564 aaKnown RBP11.02□□□□□ -0.65
SCG2-201ENST00000305409 CD93Q9NPY3 652 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 VPS29Q9UBQ0 182 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 ERVK-11Q9UQG0 969 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 BTBD3Q9Y2F9 522 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 PLEKHM1Q9Y4G2 1056 aa11.02□□□□□ -0.65
SCG2-201ENST00000305409 AQP12BA6NM10 295 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 K7EQS6 105 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 PLOD2O00469 737 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 YY2O15391 372 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 TGFB1P01137 390 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 IL6P05231 212 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 IL10P22301 178 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 CLDN8P56748 225 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 CDK3Q00526 305 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 CYP4F3Q08477 520 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 PPP1R8Q12972 351 aaKnown RBP11.01□□□□□ -0.65
SCG2-201ENST00000305409 HKDC1Q2TB90 917 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 BCL7AQ4VC05 210 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 FAM180BQ6P0A1 224 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 CHST15Q7LFX5 561 aaPredicted RBP11.01□□□□□ -0.65
SCG2-201ENST00000305409 EPHX4Q8IUS5 362 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 AQP12AQ8IXF9 295 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 CLECL1Q8IZS7 167 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 CBR4Q8N4T8 237 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 OR56A3Q8NH54 315 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 TRIM15Q9C019 465 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 SERHLQ9NQF3 203 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 CLDND1Q9NY35 253 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 C15orf38-AP3S2A0A0A6YYH1 394 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 CPSF4O95639 269 aaKnown RBP11.01□□□□□ -0.65
SCG2-201ENST00000305409 CASP9P55211 416 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 PLOD1Q02809 727 aaPredicted RBP11.01□□□□□ -0.65
SCG2-201ENST00000305409 TAP2Q03519 686 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 DPTQ07507 201 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 SLBPQ14493 270 aaKnown RBP eCLIP11.01□□□□□ -0.65
SCG2-201ENST00000305409 LIPJQ5W064 366 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 OR52E8Q6IFG1 317 aa11.01□□□□□ -0.65
SCG2-201ENST00000305409 CAPRIN2Q6IMN6 1127 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms