RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 C10orf142B7Z368 130 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 TBC1D3LB9A6J9 549 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 E7EQ34 232 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 CACNB4O00305 520 aaPredicted RBP11.62□□□□□ -0.55
TPM3-202ENST00000302206 MAN2B1O00754 1011 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 PDGFBP01127 241 aaPredicted RBP11.62□□□□□ -0.55
TPM3-202ENST00000302206 TBC1D3HP0C7X1 549 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 SRFP11831 508 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 XRCC1P18887 633 aaPredicted RBP11.62□□□□□ -0.55
TPM3-202ENST00000302206 VARSP26640 1264 aaKnown RBP11.62□□□□□ -0.55
TPM3-202ENST00000302206 IL12AP29459 219 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 NME5P56597 212 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 CTBSQ01459 385 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 HMGCS1Q01581 520 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 LAPTM5Q13571 262 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 PLA2G4EQ3MJ16 856 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 USP39Q53GS9 565 aaKnown RBP11.62□□□□□ -0.55
TPM3-202ENST00000302206 SGO1Q5FBB7 561 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 WLSQ5T9L3 541 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 ATG9BQ674R7 924 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 TBC1D3GQ6DHY5 549 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 CAPRIN2Q6IMN6 1127 aaKnown RBP11.62□□□□□ -0.55
TPM3-202ENST00000302206 TBC1D3CQ6IPX1 549 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 ZFP1Q6P2D0 407 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 LCTLQ6UWM7 567 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 SLCO4C1Q6ZQN7 724 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 ARPINQ7Z6K5 226 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 TBC1D3Q8IZP1 549 aaPredicted RBP11.62□□□□□ -0.55
TPM3-202ENST00000302206 OR2T34Q8NGX1 318 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 OR5K2Q8NHB8 316 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 WDR20Q8TBZ3 569 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 FAM3CQ92520 227 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 TFGQ92734 400 aaPredicted RBP11.62□□□□□ -0.55
TPM3-202ENST00000302206 CCDC124Q96CT7 223 aaKnown RBP11.62□□□□□ -0.55
TPM3-202ENST00000302206 LRRC58Q96CX6 371 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 ASB9Q96DX5 294 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 MED8Q96G25 268 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 TEX37Q96LM6 180 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 HAUS8Q9BT25 410 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 EFCAB11Q9BUY7 163 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 SPATA6Q9NWH7 488 aaPredicted RBP11.62□□□□□ -0.55
TPM3-202ENST00000302206 ADA2Q9NZK5 511 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 ASF1AQ9Y294 204 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 TSC22D4Q9Y3Q8 395 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 OR1A2Q9Y585 309 aa11.62□□□□□ -0.55
TPM3-202ENST00000302206 PCYT1BQ9Y5K3 369 aaPredicted RBP11.62□□□□□ -0.55
TPM3-202ENST00000302206 WDR87Q6ZQQ6 2873 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 KANSL1LA0AUZ9 987 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 KRT87PA6NCN2 255 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 ASPDHA6ND91 283 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 H0Y3Z8 333 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 FXYD1O00168 92 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 TOR1BO14657 336 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 ACOT8O14734 319 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 PRMT3O60678 531 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 SORBS2O94875 1100 aaKnown RBP11.61□□□□□ -0.55
TPM3-202ENST00000302206 ANP32DO95626 131 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 IGLV3-19P01714 112 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 CEACAM5P06731 702 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 SLC35G4P0C7Q5 338 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 HSD17B1P14061 328 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 ANPEPP15144 967 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 NPPBP16860 134 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 NDUFV2P19404 249 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 CD22P20273 847 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 HNRNPFP52597 415 aaKnown RBP11.61□□□□□ -0.55
TPM3-202ENST00000302206 CLNS1AP54105 237 aaKnown RBP11.61□□□□□ -0.55
TPM3-202ENST00000302206 CLDN8P56748 225 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 TBPL1P62380 186 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 TAP2Q03519 686 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 FLOT2Q14254 428 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 TRIM25Q14258 630 aaKnown RBP11.61□□□□□ -0.55
TPM3-202ENST00000302206 CYP2A13Q16696 494 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 SLC44A4Q53GD3 710 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 PAGE2BQ5JRK9 111 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 MSANTD1Q6ZTZ1 278 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 LAS2Q8IYD9 372 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 SYTL1Q8IYJ3 562 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 TBC1D21Q8IYX1 336 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 DNAJB8Q8NHS0 232 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 RPLP0P6Q8NHW5 317 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 HBEGFQ99075 208 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 OSBPL6Q9BZF3 934 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 DPY30Q9C005 99 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 BTBD1Q9H0C5 482 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 PCBD2Q9H0N5 130 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 SLC6A17Q9H1V8 727 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 TRIT1Q9H3H1 467 aaKnown RBP11.61□□□□□ -0.55
TPM3-202ENST00000302206 MUC13Q9H3R2 512 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 SGK2Q9HBY8 427 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 CCDC177Q9NQR7 707 aaPredicted RBP11.61□□□□□ -0.55
TPM3-202ENST00000302206 PPT2Q9UMR5 302 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 MAPRE3Q9UPY8 281 aa11.61□□□□□ -0.55
TPM3-202ENST00000302206 GVINP1Q7Z2Y8 2422 aa11.6□□□□□ -0.55
TPM3-202ENST00000302206 LRRC72A6NJI9 287 aa11.6□□□□□ -0.55
TPM3-202ENST00000302206 FOXE1O00358 373 aaPredicted RBP11.6□□□□□ -0.55
TPM3-202ENST00000302206 DNAJA2O60884 412 aa11.6□□□□□ -0.55
TPM3-202ENST00000302206 APBB3O95704 486 aa11.6□□□□□ -0.55
TPM3-202ENST00000302206 IL6P05231 212 aa11.6□□□□□ -0.55
TPM3-202ENST00000302206 C1GALT1C1LP0DN25 315 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms