RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 GSTA2P09210 222 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 UCNP55089 124 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 TMPRSS3P57727 454 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 TIAL1Q01085 375 aaKnown RBP eCLIP11.66□□□□□ -0.54
HMGB2-201ENST00000296503 TSTA3Q13630 321 aaPredicted RBP11.66□□□□□ -0.54
HMGB2-201ENST00000296503 SLC5A12Q1EHB4 618 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.66□□□□□ -0.54
HMGB2-201ENST00000296503 UBE2R2Q712K3 238 aaPredicted RBP11.66□□□□□ -0.54
HMGB2-201ENST00000296503 PIWIL4Q7Z3Z4 852 aaKnown RBP11.66□□□□□ -0.54
HMGB2-201ENST00000296503 SLC26A11Q86WA9 606 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 FAM20CQ8IXL6 584 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 NLGN4XQ8N0W4 816 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 NLGN4YQ8NFZ3 816 aaPredicted RBP11.66□□□□□ -0.54
HMGB2-201ENST00000296503 ASB11Q8WXH4 323 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 NKD1Q969G9 470 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 CRELD1Q96HD1 420 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 ZNF570Q96NI8 536 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 MENTQ9BUN1 341 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 SPRY4Q9C004 299 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 PHACTR1Q9C0D0 580 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 CPNE5Q9HCH3 593 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 ETAA1Q9NY74 926 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 MTRF1LQ9UGC7 380 aaKnown RBP11.66□□□□□ -0.54
HMGB2-201ENST00000296503 LHX6Q9UPM6 363 aa11.66□□□□□ -0.54
HMGB2-201ENST00000296503 SDK2Q58EX2 2172 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 PKD1L2Q7Z442 2459 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 EIF3FO00303 357 aaPredicted RBP11.65□□□□□ -0.54
HMGB2-201ENST00000296503 ZNF28P17035 718 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 PEBP1P30086 187 aaKnown RBP11.65□□□□□ -0.54
HMGB2-201ENST00000296503 PGGT1BP53609 377 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 PMS2P54278 862 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 GPX6P59796 221 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 IL2P60568 153 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 ARHGAP40Q5TG30 622 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 LRRC8EQ6NSJ5 796 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 PWWP2BQ6NUJ5 590 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 C6orf15Q6UXA7 325 aaPredicted RBP11.65□□□□□ -0.54
HMGB2-201ENST00000296503 TIPARPQ7Z3E1 657 aaKnown RBP11.65□□□□□ -0.54
HMGB2-201ENST00000296503 VASH2Q86V25 355 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 CTAGE3PQ8IX95 158 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 LRRC34Q8IZ02 419 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 MYO1HQ8N1T3 1032 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 C19orf47Q8N9M1 422 aaKnown RBP11.65□□□□□ -0.54
HMGB2-201ENST00000296503 FLVCR1-AS1Q8TAF5 88 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 ZNF501Q96CX3 271 aaPredicted RBP11.65□□□□□ -0.54
HMGB2-201ENST00000296503 THOC1Q96FV9 657 aaKnown RBP11.65□□□□□ -0.54
HMGB2-201ENST00000296503 TCTN2Q96GX1 697 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 RAB3IPQ96QF0 476 aaPredicted RBP11.65□□□□□ -0.54
HMGB2-201ENST00000296503 PKP4Q99569 1192 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 SYTL2Q9HCH5 934 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 LRRC4CQ9HCJ2 640 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 SMYD2Q9NRG4 433 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 SPATA7Q9P0W8 599 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 SERTAD3Q9UJW9 196 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 TMEM184BQ9Y519 407 aaPredicted RBP11.65□□□□□ -0.54
HMGB2-201ENST00000296503 ADAMTS20P59510 1910 aa11.65□□□□□ -0.54
HMGB2-201ENST00000296503 KMT2BQ9UMN6 2715 aaPredicted RBP11.64□□□□□ -0.55
HMGB2-201ENST00000296503 DSPP15924 2871 aaKnown RBP11.64□□□□□ -0.55
HMGB2-201ENST00000296503 CELSR3Q9NYQ7 3312 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 TEX51A0A1B0GUA7 166 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 FAM95CA0A1B0GW59 222 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 TCRBV9S1A1TA0A576 114 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 CXorf49A8MYA2 514 aaPredicted RBP11.64□□□□□ -0.55
HMGB2-201ENST00000296503 TMEM150CB9EJG8 249 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 GFYI3L273 518 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 NTRK1P04629 796 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 CCNYL3P0C7X3 344 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.64□□□□□ -0.55
HMGB2-201ENST00000296503 CYS1Q717R9 158 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 ZC3HC1Q86WB0 502 aaKnown RBP11.64□□□□□ -0.55
HMGB2-201ENST00000296503 TMEM126BQ8IUX1 230 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 ESX1Q8N693 406 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 GALNT6Q8NCL4 622 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 OR8K5Q8NH50 307 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 MCOLN3Q8TDD5 553 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 DENND1AQ8TEH3 1009 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 LINGO1Q96FE5 620 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 FCRL4Q96PJ5 515 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 OLFM1Q99784 485 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 INTS7Q9NVH2 962 aaKnown RBP11.64□□□□□ -0.55
HMGB2-201ENST00000296503 KLHL20Q9Y2M5 609 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 ARL2BPQ9Y2Y0 163 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 ZZEF1O43149 2961 aa11.64□□□□□ -0.55
HMGB2-201ENST00000296503 ZNF839A8K0R7 811 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 RGS16O15492 202 aaPredicted RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 SCRG1O75711 98 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 TIAF1O95411 115 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 CYP2A7P20853 494 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 MAGP20916 626 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 FDXRP22570 491 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 HSD17B2P37059 387 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 SLC12A2P55011 1212 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 MRPS35P82673 323 aaKnown RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 VAC14Q08AM6 782 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 SRSF6Q13247 344 aaKnown RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 FASTKQ14296 549 aaKnown RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 PDCD2Q16342 344 aaPredicted RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 CYP2A13Q16696 494 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 SUSD1Q6UWL2 747 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 CDHR3Q6ZTQ4 885 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms