RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 SNX20Q7Z614 316 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 GALNT6Q8NCL4 622 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 KLK6Q92876 244 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 BEX1Q9HBH7 125 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 ABCB8Q9NUT2 735 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 A0A1W2PP18 115 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 PRODHO43272 600 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 TFPIP10646 304 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 KLHL22Q53GT1 634 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 UBXN11Q5T124 520 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 C1orf52Q8N6N3 182 aaKnown RBP14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 ZNF615Q8N8J6 731 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 OR4C6Q8NH72 309 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 TIGARQ9NQ88 270 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 GKN1Q9NS71 199 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 DNAJC27Q9NZQ0 273 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 PLCL2Q9UPR0 1127 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 CMAHPQ9Y471 501 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 SCGNO76038 276 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 PIGRP01833 764 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 C8BP07358 591 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 CHRNA6Q15825 494 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 DUOXA1Q1HG43 343 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 TTTY10Q9BZA0 68 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 CCSER2Q9H7U1 834 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 XKRYO14609 159 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 MSANTD2Q6P1R3 559 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 ADGRG6Q86SQ4 1221 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 BRD7Q9NPI1 651 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 FAM72CH0Y354 149 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 SLC3A1Q07837 685 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 FAM72AQ5TYM5 149 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 FAM72DQ6L9T8 149 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 FAM72BQ86X60 149 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 CILP2Q8IUL8 1156 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 SLC37A3Q8NCC5 494 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 COL21A1Q96P44 957 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 OR2AG1Q9H205 316 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 FLRT1Q9NZU1 646 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 ERVK-18Q9QC07 812 aa14.96□□□□□ -0.01
SHROOM4-201ENST00000289292 KRT33AO76009 404 aa14.96□□□□□ -0.02
SHROOM4-201ENST00000289292 SLBPQ14493 270 aaKnown RBP eCLIP14.96□□□□□ -0.02
SHROOM4-201ENST00000289292 UGT8Q16880 541 aa14.96□□□□□ -0.02
SHROOM4-201ENST00000289292 FBXL22Q6P050 247 aa14.96□□□□□ -0.02
SHROOM4-201ENST00000289292 ULK3Q6PHR2 472 aa14.96□□□□□ -0.02
SHROOM4-201ENST00000289292 TAS1R3Q7RTX0 852 aa14.96□□□□□ -0.02
SHROOM4-201ENST00000289292 RGL4Q8IZJ4 473 aa14.96□□□□□ -0.02
SHROOM4-201ENST00000289292 NXPE1Q8N323 547 aa14.96□□□□□ -0.02
SHROOM4-201ENST00000289292 NTAN1Q96AB6 310 aa14.96□□□□□ -0.02
SHROOM4-201ENST00000289292 CACNB4O00305 520 aaPredicted RBP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 DBIP07108 87 aaKnown RBP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 ADH1AP07327 375 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 GNALP38405 381 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 SULT2A1Q06520 285 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 ZNF267Q14586 743 aaPredicted RBP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 SIX1Q15475 284 aaPredicted RBP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 ALG11Q2TAA5 492 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 KLHL36Q8N4N3 616 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 C2CD4AQ8NCU7 369 aaPredicted RBP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 YTHDF1Q9BYJ9 559 aaKnown RBP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 ANXA2P2A6NMY6 339 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 MANBAO00462 879 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 ALPPP05187 535 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 ANXA2P07355 339 aaKnown RBP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 KHKP50053 298 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 SEC13P55735 322 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 PAFAH1B3Q15102 231 aaKnown RBP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 RELL1Q8IUW5 271 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 OR6K6Q8NGW6 343 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 DPF3Q92784 378 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 CRELD1Q96HD1 420 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 VPS29Q9UBQ0 182 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 ABCG2Q9UNQ0 655 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 CFAP20Q9Y6A4 193 aaKnown RBP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 TRBC2A0A5B9 178 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 ZSCAN5BA6NJL1 495 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 DSTNP60981 165 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 SLC10A2Q12908 348 aaPredicted RBP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 CEP97Q8IW35 865 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 KRTCAP2Q8N6L1 136 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 NRG4Q8WWG1 115 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 LRCH3Q96II8 777 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 MND1Q9BWT6 205 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 CYTH4Q9UIA0 394 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 POFUT2Q9Y2G5 429 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 H3BNH8 94 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 ARVCFO00192 962 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 GIMD1P0DJR0 217 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 PTX3P26022 381 aaPredicted RBP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 DDX6P26196 483 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 CLK3P49761 638 aaKnown RBP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 AP3S2P59780 193 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 ZNF404Q494X3 552 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 SLC24A5Q71RS6 500 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 IFNLR1Q8IU57 520 aaPredicted RBP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 ARMC10Q8N2F6 343 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 PAK6Q9NQU5 681 aaPredicted RBP14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 SACM1LQ9NTJ5 587 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 TBCCD1Q9NVR7 557 aa14.95□□□□□ -0.02
SHROOM4-201ENST00000289292 CFL2Q9Y281 166 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms