RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 MLC1Q15049 377 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 AARDQ4LEZ3 155 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 GPR139Q6DWJ6 353 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 TAS2R14Q9NYV8 317 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 ALOX15BO15296 676 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 C1RP00736 705 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 CTHP32929 405 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 CCNHP51946 323 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-201ENST00000282516 STRADAQ7RTN6 431 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 DQX1Q8TE96 717 aaKnown RBP8.54□□□□□ -1.04
NIPBL-201ENST00000282516 ICKQ9UPZ9 632 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 AGPSO00116 658 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 TLR5O60602 858 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 TNFAIP8L2Q6P589 184 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-201ENST00000282516 LRTOMTQ8WZ04 291 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 RGMAQ96B86 450 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 RNF208Q9H0X6 261 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 IQCF5A8MTL0 148 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 AP2A1O95782 977 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 CYP11A1P05108 521 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 EPHX1P07099 455 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 MLLT3P42568 568 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF267Q14586 743 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-201ENST00000282516 SPATS1Q496A3 300 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 TMCO2Q7Z6W1 182 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-201ENST00000282516 PLA2G15Q8NCC3 412 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 C22orf15Q8WYQ4 148 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 TMEM41AQ96HV5 264 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 ORAI3Q9BRQ5 295 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 WRAP53Q9BUR4 548 aaKnown RBP8.54□□□□□ -1.04
NIPBL-201ENST00000282516 DUSP26Q9BV47 211 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 HHATLQ9HCP6 504 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 PNO1Q9NRX1 252 aaKnown RBP8.54□□□□□ -1.04
NIPBL-201ENST00000282516 TAS2R10Q9NYW0 307 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 E9PCH4 1651 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 MYPNQ86TC9 1320 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 PRR36Q9H6K5 1346 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 GLUD2P49448 558 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 SLC26A5P58743 744 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 MOB2Q70IA6 237 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 CYP2S1Q96SQ9 504 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 HEPHQ9BQS7 1158 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 GKN3PP0CG01 181 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 RAB4AP20338 218 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 BTBD16Q32M84 506 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 CLEC6AQ6EIG7 209 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 VTCN1Q7Z7D3 282 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 MARCH9Q86YJ5 346 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 ERI1Q8IV48 349 aaKnown RBP8.54□□□□□ -1.04
NIPBL-201ENST00000282516 LINC00116Q8NCU8 138 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 OR10G2Q8NGC3 310 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 FEM1CQ96JP0 617 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 DNTTIP1Q9H147 329 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 TCAF1Q9Y4C2 921 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 CDK14O94921 469 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 SLITRK3O94933 977 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 UQCRC1P31930 480 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 YAP1P46937 504 aaKnown RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 MAPKAP1Q9BPZ7 522 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 RPP14O95059 124 aaKnown RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 MT-ND5P03915 603 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 H1F0P07305 194 aaKnown RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 C8BP07358 591 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 MATN1P21941 496 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 NCEH1Q6PIU2 408 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 GALNT11Q8NCW6 608 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 CERKQ8TCT0 537 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 KLHL6Q8WZ60 621 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 ADAD1Q96M93 576 aaKnown RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 TUBA1CQ9BQE3 449 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 KCND1Q9NSA2 647 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 VNN3Q9NY84 501 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 SNX10Q9Y5X0 201 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 MRPL49Q13405 166 aaKnown RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 ZBED5Q49AG3 693 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF514Q96K75 400 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 SH2B3Q9UQQ2 575 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 PCYT1BQ9Y5K3 369 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 OTOL1A6NHN0 477 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 BCAS1O75363 584 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 PEX14O75381 377 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 CYP3A4P08684 503 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 POLR2HP52434 150 aaKnown RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 SP2Q02086 613 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 FGL1Q08830 312 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 DECR1Q16698 335 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 ZACNQ401N2 412 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 CELF3Q5SZQ8 465 aaKnown RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 GALNT12Q8IXK2 581 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 OR4K17Q8NGC6 315 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 FANK1Q8TC84 345 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 HDAC2Q92769 488 aaKnown RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 PLEKHA3Q9HB20 300 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 ADAM18Q9Y3Q7 739 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 CLCA3PQ9Y6N3 262 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 AP1M2Q9Y6Q5 423 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 CCDC163A0A0D9SF12 145 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 E9PAM4 449 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 POP4O95707 220 aaKnown RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 AGXTP21549 392 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms