RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 C9JVG2 144 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 BCKDKO14874 412 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 PI15O43692 258 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 PAGE1O75459 146 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 ANGPTL1O95841 491 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 MT-ND1P03886 318 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 POLR2EP19388 210 aaKnown RBP10.06□□□□□ -0.8
UPF3B-201ENST00000276201 AGXTP21549 392 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 CCR1P32246 355 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 ATP5C1P36542 298 aaKnown RBP10.06□□□□□ -0.8
UPF3B-201ENST00000276201 NEK2P51955 445 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 TPTEP56180 551 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 ZNF45Q02386 682 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 PRKCDQ05655 676 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 RAD51Q06609 339 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 CLCA4Q14CN2 919 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 PDGFRLQ15198 375 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 NKG7Q16617 165 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 ATP6AP1LQ52LC2 224 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 SIRPB2Q5JXA9 342 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 PNCKQ6P2M8 343 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 GPRIN3Q6ZVF9 776 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 ARL10Q8N8L6 244 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 TMEM105Q8N8V8 129 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 OR2T12Q8NG77 320 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 OR6P1Q8NGX9 317 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 NDNFQ8TB73 568 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 ZNF486Q96H40 463 aaPredicted RBP10.06□□□□□ -0.8
UPF3B-201ENST00000276201 LINC00597Q9H2U6 94 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 NOL6Q9H6R4 1146 aaKnown RBP10.06□□□□□ -0.8
UPF3B-201ENST00000276201 CARS2Q9HA77 564 aaKnown RBP10.06□□□□□ -0.8
UPF3B-201ENST00000276201 TM9SF3Q9HD45 589 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 DCAF13Q9NV06 445 aaKnown RBP10.06□□□□□ -0.8
UPF3B-201ENST00000276201 ZNF225Q9UK10 706 aa10.06□□□□□ -0.8
UPF3B-201ENST00000276201 CHD5Q8TDI0 1954 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 ILVBLA1L0T0 632 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 FAM172BPA6NC97 362 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 STK25O00506 426 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 RECQL5O94762 991 aaPredicted RBP10.05□□□□□ -0.8
UPF3B-201ENST00000276201 IRF1P10914 325 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 ETV6P41212 452 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 IFITM2Q01629 132 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 NPTX1Q15818 432 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 EML3Q32P44 896 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 ITPRIPL2Q3MIP1 535 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 SETMARQ53H47 684 aaPredicted RBP10.05□□□□□ -0.8
UPF3B-201ENST00000276201 Q6ZSR9 355 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 DET1Q7L5Y6 550 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 DSG4Q86SJ6 1040 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 CALHM3Q86XJ0 350 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 CHPFQ8IZ52 775 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 GLMNQ92990 594 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 RNF34Q969K3 372 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 FUBP1Q96AE4 644 aaKnown RBP10.05□□□□□ -0.8
UPF3B-201ENST00000276201 TRIM8Q9BZR9 551 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 ACTL8Q9H568 366 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 ABCC13Q9NSE7 274 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 CATSPERZQ9NTU4 200 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 CCDC59Q9P031 241 aaKnown RBP10.05□□□□□ -0.8
UPF3B-201ENST00000276201 ADGRE2Q9UHX3 823 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 DNMT3LQ9UJW3 386 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 VPS9D1Q9Y2B5 631 aa10.05□□□□□ -0.8
UPF3B-201ENST00000276201 MAGED1Q9Y5V3 778 aaPredicted RBP10.05□□□□□ -0.8
UPF3B-201ENST00000276201 TRBV5-3A0A0A0MS03 114 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 ELOVL7A1L3X0 281 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 METTL15A6NJ78 407 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 PRMT5O14744 637 aaPredicted RBP10.04□□□□□ -0.8
UPF3B-201ENST00000276201 GSTA4O15217 222 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 ASNA1O43681 348 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 GREM1O60565 184 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 DPM1O60762 260 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 GOT2P00505 430 aaKnown RBP10.04□□□□□ -0.8
UPF3B-201ENST00000276201 GLULP15104 373 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 AVPR2P30518 371 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 CTHP32929 405 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 TGFBR2P37173 567 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 MLLT6P55198 1093 aaPredicted RBP10.04□□□□□ -0.8
UPF3B-201ENST00000276201 RUNX3Q13761 415 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 PGS1Q32NB8 556 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 TOR1AIP1Q5JTV8 583 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 MSANTD2Q6P1R3 559 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 ZNF852Q6ZMS4 543 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 B3GNT8Q7Z7M8 397 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 ZBTB46Q86UZ6 589 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 RALGPS2Q86X27 583 aaPredicted RBP10.04□□□□□ -0.8
UPF3B-201ENST00000276201 MICU2Q8IYU8 434 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 ZNF687Q8N1G0 1237 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 PGBD3Q8N328 593 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 ARRDC2Q8TBH0 407 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 BRSK1Q8TDC3 778 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 EDEM1Q92611 657 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 CHFRQ96EP1 664 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 PDLIM5Q96HC4 596 aaKnown RBP10.04□□□□□ -0.8
UPF3B-201ENST00000276201 RPL10LQ96L21 214 aaKnown RBP10.04□□□□□ -0.8
UPF3B-201ENST00000276201 CDK5RAP1Q96SZ6 601 aaKnown RBP10.04□□□□□ -0.8
UPF3B-201ENST00000276201 PITX2Q99697 317 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 OR2B2Q9GZK3 357 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 C8orf33Q9H7E9 229 aaPredicted RBP10.04□□□□□ -0.8
UPF3B-201ENST00000276201 LTB4R2Q9NPC1 389 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 TAS2R13Q9NYV9 303 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms