RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 EFCAB1Q9HAE3 211 aa14.05□□□□□ -0.16
TRIM23-202ENST00000274327 LRTM1Q9HBL6 345 aa14.05□□□□□ -0.16
TRIM23-202ENST00000274327 SLC52A3Q9NQ40 469 aa14.05□□□□□ -0.16
TRIM23-202ENST00000274327 WASH6PQ9NQA3 447 aa14.05□□□□□ -0.16
TRIM23-202ENST00000274327 PRDM8Q9NQV8 689 aa14.05□□□□□ -0.16
TRIM23-202ENST00000274327 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.05□□□□□ -0.16
TRIM23-202ENST00000274327 ZNF839A8K0R7 811 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 A8MUI8 341 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 SCAMP1O15126 338 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 SMNDC1O75940 238 aaKnown RBP eCLIP14.04□□□□□ -0.16
TRIM23-202ENST00000274327 ACADSP16219 412 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 VARSP26640 1264 aaKnown RBP14.04□□□□□ -0.16
TRIM23-202ENST00000274327 NUDT2P50583 147 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 NEK2P51955 445 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 NME5P56597 212 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 MRPS35P82673 323 aaKnown RBP14.04□□□□□ -0.16
TRIM23-202ENST00000274327 MAD2L1Q13257 205 aaPredicted RBP14.04□□□□□ -0.16
TRIM23-202ENST00000274327 KIAA0040Q15053 153 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 RPS6KA2Q15349 733 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 RPE65Q16518 533 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 IMPG1Q17R60 797 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 PRAMEF14Q5SWL7 426 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 IL23RQ5VWK5 629 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 PRAMEF13Q5VWM6 474 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 REP15Q6BDI9 236 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 ABRAXAS1Q6UWZ7 409 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 DSELQ8IZU8 1212 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 SLC22A18ASQ8N1D0 253 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 FAM160A2Q8N612 972 aaPredicted RBP14.04□□□□□ -0.16
TRIM23-202ENST00000274327 TSPEARQ8WU66 669 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 SLC5A11Q8WWX8 675 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 CAMK1GQ96NX5 476 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 THTPAQ9BU02 230 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 C1orf109Q9NX04 203 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 TRNAU1APQ9NX07 287 aaKnown RBP14.04□□□□□ -0.16
TRIM23-202ENST00000274327 SCHIP1Q9P0W5 487 aaPredicted RBP14.04□□□□□ -0.16
TRIM23-202ENST00000274327 THEGQ9P2T0 379 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 PCOLCE2Q9UKZ9 415 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 POLR3HQ9Y535 204 aaPredicted RBP14.04□□□□□ -0.16
TRIM23-202ENST00000274327 DGKBQ9Y6T7 804 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 FANCMQ8IYD8 2048 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 A0A088AWK7 358 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 BBIP1A8MTZ0 92 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 PDZK1P1A8MUH7 402 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 C1GALT1C1LP0DN25 315 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 MTHFD1P11586 935 aaKnown RBP14.04□□□□□ -0.16
TRIM23-202ENST00000274327 SLC2A4P14672 509 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 UFM1P61960 85 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 RPL38P63173 70 aaKnown RBP14.04□□□□□ -0.16
TRIM23-202ENST00000274327 CSTF3Q12996 717 aaKnown RBP14.04□□□□□ -0.16
TRIM23-202ENST00000274327 CATSPEREQ5SY80 951 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 BLOC1S3Q6QNY0 202 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 NXPE4Q6UWF7 544 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 C16orf89Q6UX73 402 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 TMPRSS11BQ86T26 416 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 SCUBE1Q8IWY4 988 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 DEFB107AQ8IZN7 70 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 CAMKK1Q8N5S9 505 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 FAM174AQ8TBP5 190 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 CMTM7Q96FZ5 175 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 NPAS2Q99743 824 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 NRTNQ99748 197 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 HAUS8Q9BT25 410 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 EFCAB11Q9BUY7 163 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 PCED1AQ9H1Q7 454 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 IMP3Q9NV31 184 aaKnown RBP14.04□□□□□ -0.16
TRIM23-202ENST00000274327 STOML1Q9UBI4 398 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 TBC1D29Q9UFV1 150 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 PCDHGA11Q9Y5H2 935 aa14.04□□□□□ -0.16
TRIM23-202ENST00000274327 A0A1W2PPV9 198 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 ANKRD28O15084 1053 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 NRP2O60462 931 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 G6PDP11413 515 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 HSD3B1P14060 373 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 ATP6V1C1P21283 382 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 HSD3B2P26439 372 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 AK4P27144 223 aaPredicted RBP14.03□□□□□ -0.16
TRIM23-202ENST00000274327 PKLRP30613 574 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 MTAPQ13126 283 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 TSTA3Q13630 321 aaPredicted RBP14.03□□□□□ -0.16
TRIM23-202ENST00000274327 TAF11Q15544 211 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 PGM2L1Q6PCE3 622 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 CYP20A1Q6UW02 462 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 HACD2Q6Y1H2 254 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 LPCAT2Q7L5N7 544 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 RD3Q7Z3Z2 195 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 NRROSQ86YC3 692 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 ULK2Q8IYT8 1036 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 PGAM4Q8N0Y7 254 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 SMPDL3AQ92484 453 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 FCRL1Q96LA6 429 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 TEX37Q96LM6 180 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 MRPL1Q9BYD6 325 aaKnown RBP14.03□□□□□ -0.16
TRIM23-202ENST00000274327 TMEM168Q9H0V1 697 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 ACTL8Q9H568 366 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 SPATA6Q9NWH7 488 aaPredicted RBP14.03□□□□□ -0.16
TRIM23-202ENST00000274327 NDE1Q9NXR1 346 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 EIF3LQ9Y262 564 aaKnown RBP14.03□□□□□ -0.16
TRIM23-202ENST00000274327 HEBP2Q9Y5Z4 205 aa14.03□□□□□ -0.16
TRIM23-202ENST00000274327 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms