RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 GALPQ9UBC7 116 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 CRYL1Q9Y2S2 319 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 PPP2R2CQ9Y2T4 447 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 NEU2Q9Y3R4 380 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 JRKLQ9Y4A0 524 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 ZNF106Q9H2Y7 1883 aaKnown RBP9.32□□□□□ -0.92
VPS41-201ENST00000265745 FAM237BA0A1B0GVD1 139 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 SDR42E2A6NKP2 422 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 MASP2O00187 686 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 DSCR3O14972 297 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 VPS4BO75351 444 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 KRT14P02533 472 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 ALBP02768 609 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 PIM1P11309 404 aaPredicted RBP9.31□□□□□ -0.92
VPS41-201ENST00000265745 MLNP12872 115 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 PKMP14618 531 aaKnown RBP9.31□□□□□ -0.92
VPS41-201ENST00000265745 PAMP19021 973 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 PSMB5P28074 263 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 UQCRFS1P47985 274 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 VPS41P49754 854 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 TERF1P54274 439 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 YBX1P67809 324 aaKnown RBP9.31□□□□□ -0.92
VPS41-201ENST00000265745 FASTKQ14296 549 aaKnown RBP9.31□□□□□ -0.92
VPS41-201ENST00000265745 MYBPC3Q14896 1274 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 INPP5JQ15735 1006 aaPredicted RBP9.31□□□□□ -0.92
VPS41-201ENST00000265745 NKG7Q16617 165 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 FAM214AQ32MH5 1076 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 ANKRD20A4Q4UJ75 823 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 ACSBG2Q5FVE4 666 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.31□□□□□ -0.92
VPS41-201ENST00000265745 WASHC2DQ5SRD0 308 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 SLC6A19Q695T7 634 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 FBXO42Q6P3S6 717 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 CNSTQ6PJW8 725 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 IGFL3Q6UXB1 125 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 GALNT16Q8N428 558 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 RASGEF1CQ8N431 466 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 RAB42Q8N4Z0 105 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 CLEC1AQ8NC01 280 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 MCUQ8NE86 351 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.31□□□□□ -0.92
VPS41-201ENST00000265745 MAGOHBQ96A72 148 aaKnown RBP9.31□□□□□ -0.92
VPS41-201ENST00000265745 PNPLA2Q96AD5 504 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 FKBP10Q96AY3 582 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 FAM136AQ96C01 138 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 MS4A14Q96JA4 679 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 PBKQ96KB5 322 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 PSMG3-AS1Q96PY0 264 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 MIPEPQ99797 713 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 TRIM56Q9BRZ2 755 aaKnown RBP9.31□□□□□ -0.92
VPS41-201ENST00000265745 SLC26A1Q9H2B4 701 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 ZNF552Q9H707 407 aaPredicted RBP9.31□□□□□ -0.92
VPS41-201ENST00000265745 WDR54Q9H977 334 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 SLAMF7Q9NQ25 335 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 IL1RAPL1Q9NZN1 696 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 VPS4AQ9UN37 437 aa9.31□□□□□ -0.92
VPS41-201ENST00000265745 LOC105369274A0A096LPK9 316 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 LOC102723532A0A0G2JNH3 316 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 A0A0J9YVX5 310 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 ZCWPW2A0A1B0GU75 182 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 HYKKA2RU49 373 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 OR2A25A4D2G3 310 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 VSTM2BA6NLU5 285 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 ARHGEF33A8MVX0 844 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 AGPSO00116 658 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 MYO1CO00159 1063 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 NRP2O60462 931 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 PSIP1O75475 530 aaKnown RBP9.3□□□□□ -0.92
VPS41-201ENST00000265745 MED26O95402 600 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 ALPPP05187 535 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 ERGP11308 486 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 GNLYP22749 145 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 MMP11P24347 488 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 COILP38432 576 aaPredicted RBP9.3□□□□□ -0.92
VPS41-201ENST00000265745 OR1D4P47884 311 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 CLCN7P51798 805 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 VSX2P58304 361 aaPredicted RBP9.3□□□□□ -0.92
VPS41-201ENST00000265745 DHX34Q14147 1143 aaKnown RBP9.3□□□□□ -0.92
VPS41-201ENST00000265745 CYP1B1Q16678 543 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 KLHL38Q2WGJ6 581 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 PLEKHN1Q494U1 663 aaPredicted RBP9.3□□□□□ -0.92
VPS41-201ENST00000265745 FRMPD2BQ6IN97 320 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 CASC4Q6P4E1 433 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 COX15Q7KZN9 410 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 OR4N4Q8N0Y3 316 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 OR9A1PQ8NGU1 263 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 SMPDL3AQ92484 453 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 SERPINB12Q96P63 405 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 XAB2Q9HCS7 855 aaKnown RBP9.3□□□□□ -0.92
VPS41-201ENST00000265745 ATP13A2Q9NQ11 1180 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 INTS10Q9NVR2 710 aaKnown RBP9.3□□□□□ -0.92
VPS41-201ENST00000265745 SPATA7Q9P0W8 599 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 LUZP4Q9P127 313 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 SAMD15Q9P1V8 674 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 KLHL42Q9P2K6 505 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 MED16Q9Y2X0 877 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 USP9XQ93008 2570 aaPredicted RBP9.3□□□□□ -0.92
VPS41-201ENST00000265745 NAV2Q8IVL1 2488 aa9.3□□□□□ -0.92
VPS41-201ENST00000265745 USP9YO00507 2555 aaPredicted RBP9.29□□□□□ -0.92
VPS41-201ENST00000265745 TCP11X1B4DZS4 312 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms