RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 DOCK2Q92608 1830 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 TMCC2O75069 709 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 CREG1O75629 220 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 RAB14P61106 215 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 GRSF1Q12849 480 aaKnown RBP eCLIP16.29■□□□□ 0.23e-14■■■□□ 14.8
PHRF1-201ENST00000264555 OSBPL10Q9BXB5 764 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 R3HDMLQ9H3Y0 253 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 USP3Q9Y6I4 520 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 SLC16A5O15375 505 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 POU2F1P14859 743 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 GLDCP23378 1020 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 DPY19L3Q6ZPD9 716 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 ISCA2Q86U28 154 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 POF1BQ8WVV4 589 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 IPCEF1Q8WWN9 437 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-201ENST00000264555 PYURFQ96I23 114 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 BCORQ6W2J9 1755 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 PRORSD1PA6NEY8 169 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 RSL1D1O76021 490 aaKnown RBP16.29■□□□□ 0.2
PHRF1-201ENST00000264555 PSMA1P25786 263 aaKnown RBP16.29■□□□□ 0.2
PHRF1-201ENST00000264555 ALDH4A1P30038 563 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 NANOGP8Q6NSW7 305 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 POMGNT2Q8NAT1 580 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 SMYD1Q8NB12 490 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 TFGQ92734 400 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-201ENST00000264555 SLC22A18Q96BI1 424 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 LRIG1Q96JA1 1093 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 NANOGQ9H9S0 305 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 IGSF5Q9NSI5 407 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 MRTO4Q9UKD2 239 aaKnown RBP16.29■□□□□ 0.2
PHRF1-201ENST00000264555 DGKBQ9Y6T7 804 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 KLK1P06870 262 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 CRISP3P54108 245 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 OR4D1Q15615 310 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 NADK2Q4G0N4 442 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 KDELC1Q6UW63 502 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 DNASE1L2Q92874 299 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 MGME1Q9BQP7 344 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 PRSS51A0A1B0GVH4 220 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 LEFTY1O75610 366 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 MYL9P24844 172 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 AKT2P31751 481 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 STK19P49842 368 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-201ENST00000264555 TMEM115Q12893 351 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-201ENST00000264555 GPR153Q6NV75 609 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 HACD2Q6Y1H2 254 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 PIGXQ8TBF5 258 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 HERC2P3Q9BVR0 1158 aa16.29■□□□□ 0.2
PHRF1-201ENST00000264555 SLC25A12O75746 678 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 MPC1LP0DKB6 136 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 NDUFS1P28331 727 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 RAB33AQ14088 237 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 ZNF805Q5CZA5 627 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 FCGR1BQ92637 280 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 C1GALT1C1Q96EU7 318 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 AIG1Q9NVV5 245 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 ZNF99A8MXY4 864 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-201ENST00000264555 TEX28O15482 410 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 ALOX5P09917 674 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 CLCNKAP51800 687 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 DSTNP60981 165 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 CCNIQ14094 377 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 MYBPC3Q14896 1274 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 ALDH3A2P51648 485 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 APLP1P51693 650 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 TMPRSS11AQ6ZMR5 421 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 PAQR9Q6ZVX9 377 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 GPR65Q8IYL9 337 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 GALNT15Q8N3T1 639 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 OR10G2Q8NGC3 310 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 OR8J3Q8NGG0 315 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 SLC5A11Q8WWX8 675 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 KCNN1Q92952 543 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 COPS4Q9BT78 406 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 CLDN4O14493 209 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 MPIP34949 423 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 NCBP2P52298 156 aaKnown RBP eCLIP16.28■□□□□ 0.22e-7■□□□□ 9.6
PHRF1-201ENST00000264555 LRRC32Q14392 662 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 SPRED3Q2MJR0 410 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 ALG11Q2TAA5 492 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 PYDC2Q56P42 97 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 PPP2R2DQ66LE6 453 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 CGB2Q6NT52 195 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 ARHGAP12Q8IWW6 846 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 OR9A1PQ8NGU1 263 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 ZNF483Q8TF39 744 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-201ENST00000264555 TPT1P8Q9HAU6 139 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 TAC3Q9UHF0 121 aa16.28■□□□□ 0.2
PHRF1-201ENST00000264555 LTBP4Q8N2S1 1624 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 CHST10O43529 356 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 B3GALT2O43825 422 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 AIREO43918 545 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 PENKP01210 267 aaPredicted RBP16.27■□□□□ 0.2
PHRF1-201ENST00000264555 CPN2P22792 545 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 GDI1P31150 447 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 ZNF155Q12901 538 aaPredicted RBP16.27■□□□□ 0.2
PHRF1-201ENST00000264555 CEACAM7Q14002 265 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 LIPJQ5W064 366 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 CXXC5Q7LFL8 322 aaKnown RBP16.27■□□□□ 0.2
PHRF1-201ENST00000264555 ADGRG2Q8IZP9 1017 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms