RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PBX3P40426 434 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 PITPNAQ00169 270 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 KLHL22Q53GT1 634 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 DNAJB7Q7Z6W7 309 aaPredicted RBP11.78□□□□□ -0.52
SMG6-201ENST00000263073 RANBP3LQ86VV4 465 aaPredicted RBP11.78□□□□□ -0.52
SMG6-201ENST00000263073 HSH2DQ96JZ2 352 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 ZSWIM3Q96MP5 696 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 PIGVQ9NUD9 493 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 OR1I1O60431 355 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 GNAO1P09471 354 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 CD97P48960 835 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 HADHBP55084 474 aaKnown RBP11.78□□□□□ -0.52
SMG6-201ENST00000263073 HNRNPA0Q13151 305 aaKnown RBP11.78□□□□□ -0.52
SMG6-201ENST00000263073 TAF1AQ15573 450 aaPredicted RBP11.78□□□□□ -0.52
SMG6-201ENST00000263073 PRPF38BQ5VTL8 546 aaKnown RBP11.78□□□□□ -0.52
SMG6-201ENST00000263073 OR2T5Q6IEZ7 315 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 OR4F6Q8NGB9 312 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 OR5T3Q8NGG3 340 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 OR2T29Q8NH02 315 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 OR14C36Q8NHC7 312 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 FCGR1BQ92637 280 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 RPF2Q9H7B2 306 aaKnown RBP11.78□□□□□ -0.52
SMG6-201ENST00000263073 CD320Q9NPF0 282 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 DMAC2Q9NW81 257 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 SLC22A14Q9Y267 594 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 MYO5BQ9ULV0 1848 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 ALPPP05187 535 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 PRPS2P11908 318 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 AOC1P19801 751 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 BTN3A2P78410 334 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 PRKCDQ05655 676 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 CBLBQ13191 982 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 RFTN2Q52LD8 501 aaPredicted RBP11.78□□□□□ -0.52
SMG6-201ENST00000263073 HSDL2Q6YN16 418 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 GET4Q7L5D6 327 aaPredicted RBP11.78□□□□□ -0.52
SMG6-201ENST00000263073 DGLUCYQ7Z3D6 616 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 ZNF548Q8NEK5 533 aaPredicted RBP11.78□□□□□ -0.52
SMG6-201ENST00000263073 OR5J2Q8NH18 312 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 SMPDL3BQ92485 455 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 SNX27Q96L92 541 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 FUZQ9BT04 418 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 OR2AG1Q9H205 316 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 TMEM59LQ9UK28 342 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 ZNF541Q9H0D2 1346 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 IFNA7P01567 189 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 C8orf89P0DMQ9 161 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 SNHG28P0DPA3 235 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 CBLP22681 906 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 FECHP22830 423 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 BDKRB1P46663 353 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 TEAD4Q15561 434 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 ZNF311Q5JNZ3 666 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 COX18Q8N8Q8 333 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 ZNF347Q96SE7 839 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 METTL8Q9H825 291 aaKnown RBP11.77□□□□□ -0.52
SMG6-201ENST00000263073 PADI3Q9ULW8 664 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 PLAGL1Q9UM63 463 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 DERAQ9Y315 318 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 K7EPI3 171 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 GPD2P43304 727 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 RPS24P62847 133 aaKnown RBP11.77□□□□□ -0.52
SMG6-201ENST00000263073 MOGQ16653 247 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 KCTD9Q7L273 389 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 ERMP1Q7Z2K6 904 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 CRELD1Q96HD1 420 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 LGR4Q9BXB1 951 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 PRRG4Q9BZD6 226 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 ADAP2Q9NPF8 381 aa11.77□□□□□ -0.52
SMG6-201ENST00000263073 ELOA3DA6NLF2 546 aaPredicted RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 ARVCFO00192 962 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 ERN1O75460 977 aaKnown RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 VIPP01282 170 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 EIF1AXP47813 144 aaKnown RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 ELOA3BQ3SY89 546 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 ZNF404Q494X3 552 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 ELOA3Q8NG57 546 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 SLC30A2Q9BRI3 323 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 TRIM2Q9C040 744 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 THUMPD1Q9NXG2 353 aaKnown RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 DNAJB4Q9UDY4 337 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 ZNF451Q9Y4E5 1061 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 MAFBQ9Y5Q3 323 aaPredicted RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 TEX264Q9Y6I9 313 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 A0A1B0GVG6 124 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 TRBC2A0A5B9 178 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 JUNP05412 331 aaKnown RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 MRPL3P09001 348 aaKnown RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 DLDP09622 509 aaKnown RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 DPYSL2Q16555 572 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 C1orf52Q8N6N3 182 aaKnown RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 POGLUT1Q8NBL1 392 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 HNRNPABQ99729 332 aaKnown RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 MS4A12Q9NXJ0 267 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 ZNF282Q9UDV7 671 aaPredicted RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 CFL2Q9Y281 166 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 RNF11Q9Y3C5 154 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 PCDHA2Q9Y5H9 948 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 A8MUA0 341 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 LOC730098B7Z3J9 87 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 APOC1P02654 83 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms