RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ZKSCAN5Q9Y2L8 839 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 NIPSNAP2O75323 286 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 WFS1O76024 890 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 CBX6O95503 412 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 ESR1P03372 595 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 HEXBP07686 556 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 CCDC175P0C221 793 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 ZGLP1P0C6A0 271 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 MYBL2P10244 700 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 PKMP14618 531 aaKnown RBP11.7□□□□□ -0.54
TRAF4-202ENST00000262396 HSD17B2P37059 387 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 KCNJ1P48048 391 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 EMP2P54851 167 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 SOX8P57073 446 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 CDK16Q00536 496 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 KLC1Q07866 573 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 MFSD4BQ5TF39 518 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 MEI1Q5TIA1 1274 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 FRMPD2BQ6IN97 320 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 LRRC8BQ6P9F7 803 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 SUSD1Q6UWL2 747 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 KIRREL2Q6UWL6 708 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 Q6ZS92 163 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 CUZD1Q86UP6 607 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 TMEM139Q8IV31 216 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 KBTBD2Q8IY47 623 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 CSNK1A1LQ8N752 337 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 SUN3Q8TAQ9 357 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 STT3BQ8TCJ2 826 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 MFSD3Q96ES6 412 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 MMABQ96EY8 250 aaPredicted RBP11.7□□□□□ -0.54
TRAF4-202ENST00000262396 SPSB2Q99619 263 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.7□□□□□ -0.548e-8■■■□□ 17.6
TRAF4-202ENST00000262396 P2RY12Q9H244 342 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 SLC26A1Q9H2B4 701 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 ZBTB20Q9HC78 741 aaPredicted RBP11.7□□□□□ -0.54
TRAF4-202ENST00000262396 SLC22A11Q9NSA0 550 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 SYBUQ9NX95 663 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 NOVA2Q9UNW9 492 aaKnown RBP11.7□□□□□ -0.54
TRAF4-202ENST00000262396 PCDHGA10Q9Y5H3 936 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 HS3ST3B1Q9Y662 390 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 RELNP78509 3460 aa11.7□□□□□ -0.54
TRAF4-202ENST00000262396 MED13Q9UHV7 2174 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 ESPL1Q14674 2120 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 TXNDC9O14530 226 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 SOCS6O14544 535 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 CTSVO60911 334 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 PHF2O75151 1096 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 USP1O94782 785 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 HPP00738 406 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 AP2B1P63010 937 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 GPS1Q13098 491 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 GRB7Q14451 532 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 NAA30Q147X3 362 aaPredicted RBP11.69□□□□□ -0.54
TRAF4-202ENST00000262396 NDUFA9Q16795 377 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 KLHL38Q2WGJ6 581 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 CCSMST1Q4G0I0 132 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 FAAH2Q6GMR7 532 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 NEPROQ6NW34 567 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 PALM2Q8IXS6 379 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 ST6GALNAC3Q8NDV1 305 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 TRIM58Q8NG06 486 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 OR11G2Q8NGC1 345 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 OR1N1Q8NGS0 311 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 MCOLN3Q8TDD5 553 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 METTL21AQ8WXB1 218 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 C8orf44Q96CB5 159 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 EBNA1BP2Q99848 306 aaKnown RBP11.69□□□□□ -0.54
TRAF4-202ENST00000262396 MENTQ9BUN1 341 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 TREX1Q9NSU2 369 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 PTGFRNQ9P2B2 879 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 STOX2Q9P2F5 926 aaPredicted RBP11.69□□□□□ -0.54
TRAF4-202ENST00000262396 ERRFI1Q9UJM3 462 aaPredicted RBP11.69□□□□□ -0.54
TRAF4-202ENST00000262396 SOX13Q9UN79 622 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 OSGIN2Q9Y236 505 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 PIKFYVEQ9Y2I7 2098 aa11.69□□□□□ -0.54
TRAF4-202ENST00000262396 SEC16AO15027 2179 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 LOC105369274A0A096LPK9 316 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 LOC102723532A0A0G2JNH3 316 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 FITM1A5D6W6 292 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 KRT87PA6NCN2 255 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 H0YGG7 62 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 ZBTB14O43829 449 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 TPSB2P20231 275 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 OGNP20774 298 aaKnown RBP11.68□□□□□ -0.54
TRAF4-202ENST00000262396 ATP5DP30049 168 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 AVPR1BP47901 424 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 PNLIPRP1P54315 467 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 ARF3P61204 181 aaPredicted RBP11.68□□□□□ -0.54
TRAF4-202ENST00000262396 EEF1A2Q05639 463 aaKnown RBP11.68□□□□□ -0.54
TRAF4-202ENST00000262396 DHX34Q14147 1143 aaKnown RBP11.68□□□□□ -0.54
TRAF4-202ENST00000262396 FASTKQ14296 549 aaKnown RBP11.68□□□□□ -0.54
TRAF4-202ENST00000262396 TPSAB1Q15661 275 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 VWA2Q5GFL6 755 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 CTSL3PQ5NE16 218 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 B3GNTL1Q67FW5 361 aaPredicted RBP11.68□□□□□ -0.54
TRAF4-202ENST00000262396 KIAA0930Q6ICG6 404 aaPredicted RBP11.68□□□□□ -0.54
TRAF4-202ENST00000262396 DRICH1Q6PGQ1 229 aaPredicted RBP11.68□□□□□ -0.54
TRAF4-202ENST00000262396 COX15Q7KZN9 410 aa11.68□□□□□ -0.54
TRAF4-202ENST00000262396 RNF44Q7L0R7 432 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms