RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CHRNGP07510 517 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 ZNF806P0C7X5 589 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 ZNF24P17028 368 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 PSMB5P28074 263 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 SLC6A12P48065 614 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 TBPL1P62380 186 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 TAP2Q03519 686 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 C14orf28Q4W4Y0 310 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 RAB44Q7Z6P3 723 aaPredicted RBP26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 SDR16C5Q8N3Y7 309 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 DCBLD1Q8N8Z6 715 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 L3HYPDHQ96EM0 354 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 ACAT2Q9BWD1 397 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 SLCO1B3Q9NPD5 702 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 NCDNQ9UBB6 729 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 LRCH1Q9Y2L9 728 aa26.59■■□□□ 1.85
SMARCD3-201ENST00000262188 SIGLEC6O43699 453 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 DFNA5O60443 496 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 RPS17P08708 135 aaKnown RBP26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 SLC2A4P14672 509 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 PKLRP30613 574 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 PRR23CQ6ZRP0 262 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 C17orf82Q86X59 251 aaPredicted RBP26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 FAM20CQ8IXL6 584 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 CCDC126Q96EE4 140 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 OR4K3Q96R72 315 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 YIPF2Q9BWQ6 316 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 SEMA4GQ9NTN9 838 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 NLGN3Q9NZ94 848 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 SH2B3Q9UQQ2 575 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 COMMD3-BMI1R4GMX3 469 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 STK16O75716 305 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 ATP5HO75947 161 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 SERPINE1P05121 402 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 HNMTP50135 292 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 CFAP157Q5JU67 520 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 LRRC8CQ8TDW0 803 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 TRPC4APQ8TEL6 797 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 MAGEB18Q96M61 343 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 SPHK1Q9NYA1 384 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 RNF215Q9Y6U7 377 aa26.58■■□□□ 1.85
SMARCD3-201ENST00000262188 NDUFS1P28331 727 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 RAB28P51157 221 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 PCBP2Q15366 365 aaKnown RBP eCLIP26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 CHCHD2P9Q5T1J5 151 aaPredicted RBP26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 TMEM26Q6ZUK4 368 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 FAM47EQ6ZV65 393 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 GOLGA7Q7Z5G4 137 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 LSMEM2Q8N112 164 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 ARL10Q8N8L6 244 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 OR4C6Q8NH72 309 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 UBTD2Q8WUN7 234 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 TNFRSF12AQ9NP84 129 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 OPTCQ9UBM4 332 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 LNPEPQ9UIQ6 1025 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 TCP11X1B4DZS4 312 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 BTN3A3O00478 584 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 CDX4O14627 284 aaPredicted RBP26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 KRT16P08779 473 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 ERGP11308 486 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 GGT5P36269 586 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 STX3Q13277 289 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 CYP2A13Q16696 494 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 CDKL4Q5MAI5 379 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 ANKS6Q68DC2 871 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 THOC6Q86W42 341 aaKnown RBP26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 AMIGO1Q86WK6 493 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 OR56A3Q8NH54 315 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 OR10G6Q8NH81 332 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 AGR3Q8TD06 166 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 PPP4R1Q8TF05 950 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 DNAJC9Q8WXX5 260 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 PRR11Q96HE9 360 aaPredicted RBP26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 CDK15Q96Q40 435 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 RAPGEFL1Q9UHV5 662 aa26.57■■□□□ 1.84
SMARCD3-201ENST00000262188 UBFD1O14562 309 aaKnown RBP26.56■■□□□ 1.84
SMARCD3-201ENST00000262188 UBOX5O94941 541 aa26.56■■□□□ 1.84
SMARCD3-201ENST00000262188 TYRP1P17643 537 aa26.56■■□□□ 1.84
SMARCD3-201ENST00000262188 EPORP19235 508 aa26.56■■□□□ 1.84
SMARCD3-201ENST00000262188 PRDX3P30048 256 aaKnown RBP26.56■■□□□ 1.84
SMARCD3-201ENST00000262188 PEBP1P30086 187 aaKnown RBP26.56■■□□□ 1.84
SMARCD3-201ENST00000262188 SNX31Q8N9S9 440 aa26.56■■□□□ 1.84
SMARCD3-201ENST00000262188 ATL1Q8WXF7 558 aa26.56■■□□□ 1.84
SMARCD3-201ENST00000262188 APOLD1Q96LR9 279 aa26.56■■□□□ 1.84
SMARCD3-201ENST00000262188 SRMSQ9H3Y6 488 aa26.56■■□□□ 1.84
SMARCD3-201ENST00000262188 TMEM165Q9HC07 324 aa26.56■■□□□ 1.84
SMARCD3-201ENST00000262188 LY6G6EA0A0G2JKS1 128 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 A0A1W2PPV9 198 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 YKT6O15498 198 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 FASLGP48023 281 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 GTF2H2Q13888 395 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 ARL13AQ5H913 290 aaPredicted RBP26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 GTF2H2CQ6P1K8 395 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 FRMD7Q6ZUT3 714 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 TCAIMQ8N3R3 496 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 ZBTB8BQ8NAP8 495 aaPredicted RBP26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 OR52B6Q8NGF0 335 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 NOL11Q9H8H0 719 aaKnown RBP26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 LRIT1Q9P2V4 623 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 PAIP2BQ9ULR5 123 aaKnown RBP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms