RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 HES3Q5TGS1 186 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 TMEM71Q6P5X7 295 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 C2orf73Q8N5S3 287 aaPredicted RBP19.98■□□□□ 0.79
RTCA-201ENST00000260563 ATL1Q8WXF7 558 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 ESAMQ96AP7 390 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 CHMP6Q96FZ7 201 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 ZDHHC12Q96GR4 267 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 CNDP1Q96KN2 507 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 TGM7Q96PF1 710 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 ZNF317Q96PQ6 595 aaPredicted RBP19.98■□□□□ 0.79
RTCA-201ENST00000260563 DRC3Q9H069 523 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 THAP1Q9NVV9 213 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 EPHA6Q9UF33 1036 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 ENTPD2Q9Y5L3 495 aa19.98■□□□□ 0.79
RTCA-201ENST00000260563 LRRC14BA6NHZ5 514 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 VIMP08670 466 aaKnown RBP19.97■□□□□ 0.79
RTCA-201ENST00000260563 GGT5P36269 586 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 SERPINB5P36952 375 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 HSPA7P48741 367 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 NAA20P61599 178 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 PPP1CAP62136 330 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 TSTA3Q13630 321 aaPredicted RBP19.97■□□□□ 0.79
RTCA-201ENST00000260563 RCN2Q14257 317 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 FASTKQ14296 549 aaKnown RBP19.97■□□□□ 0.79
RTCA-201ENST00000260563 TMPRSS9Q7Z410 1059 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 LMNTD1Q8N9Z9 388 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 PPFIBP2Q8ND30 876 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 OR4D9Q8NGE8 314 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 PPP4R1Q8TF05 950 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 SLC22A18Q96BI1 424 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 CD244Q9BZW8 370 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 C20orf27Q9GZN8 174 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 GSTO2Q9H4Y5 243 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 SLCO1B3Q9NPD5 702 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 ACTR10Q9NZ32 417 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 TMEM9Q9P0T7 183 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 KLHL3Q9UH77 587 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 ASB1Q9Y576 335 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 GMNCA6NCL1 334 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 ISM1B1AKI9 464 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 E2F3O00716 465 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 ITM2AO43736 263 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 LYPLA1O75608 230 aaPredicted RBP19.97■□□□□ 0.79
RTCA-201ENST00000260563 C9P02748 559 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 PEBP1P30086 187 aaKnown RBP19.97■□□□□ 0.79
RTCA-201ENST00000260563 SEC24CP53992 1094 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 TBPL1P62380 186 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 KIR2DS3Q14952 304 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 METTL2BQ6P1Q9 378 aaKnown RBP19.97■□□□□ 0.79
RTCA-201ENST00000260563 AGTRAPQ6RW13 159 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 FRMD7Q6ZUT3 714 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 FAM47EQ6ZV65 393 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 RPS27LQ71UM5 84 aaKnown RBP19.97■□□□□ 0.79
RTCA-201ENST00000260563 LRRC34Q8IZ02 419 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 ADAMTS14Q8WXS8 1223 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 SMPDL3AQ92484 453 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 ZNF395Q9H8N7 513 aaPredicted RBP19.97■□□□□ 0.79
RTCA-201ENST00000260563 SPHK1Q9NYA1 384 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 PCTPQ9UKL6 214 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 POMT2Q9UKY4 750 aa19.97■□□□□ 0.79
RTCA-201ENST00000260563 SRRM3A6NNA2 597 aaPredicted RBP19.96■□□□□ 0.79
RTCA-201ENST00000260563 E7ENX8 843 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 HSPA4LO95757 839 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 THRAP10827 490 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 HOXB3P14651 431 aaPredicted RBP19.96■□□□□ 0.79
RTCA-201ENST00000260563 UGT2B7P16662 529 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 ARRB2P32121 409 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 PDX1P52945 283 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 CLDN6P56747 220 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 OCRLQ01968 901 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 TAP2Q03519 686 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 ZXDCQ2QGD7 858 aaPredicted RBP19.96■□□□□ 0.79
RTCA-201ENST00000260563 CDCP2Q5VXM1 449 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 SPESP1Q6UW49 350 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 SUSD1Q6UWL2 747 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 FAM92BQ6ZTR7 304 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 ZNF483Q8TF39 744 aaPredicted RBP19.96■□□□□ 0.79
RTCA-201ENST00000260563 MED8Q96G25 268 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 C7orf26Q96N11 449 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 TMEM74Q96NL1 305 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 DEPDC7Q96QD5 511 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 CD180Q99467 661 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 TWSG1Q9GZX9 223 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 ATG10Q9H0Y0 220 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 EPN3Q9H201 632 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 CCDC177Q9NQR7 707 aaPredicted RBP19.96■□□□□ 0.79
RTCA-201ENST00000260563 CLCA2Q9UQC9 943 aa19.96■□□□□ 0.79
RTCA-201ENST00000260563 TLCD2A6NGC4 264 aa19.95■□□□□ 0.78
RTCA-201ENST00000260563 CCNT2O60583 730 aaKnown RBP19.95■□□□□ 0.78
RTCA-201ENST00000260563 EDF1O60869 148 aaKnown RBP19.95■□□□□ 0.78
RTCA-201ENST00000260563 STK16O75716 305 aa19.95■□□□□ 0.78
RTCA-201ENST00000260563 RASSF9O75901 435 aa19.95■□□□□ 0.78
RTCA-201ENST00000260563 MT-CO3P00414 261 aa19.95■□□□□ 0.78
RTCA-201ENST00000260563 MPSTP25325 297 aa19.95■□□□□ 0.78
RTCA-201ENST00000260563 CCR10P46092 362 aa19.95■□□□□ 0.78
RTCA-201ENST00000260563 SLC6A12P48065 614 aa19.95■□□□□ 0.78
RTCA-201ENST00000260563 CDH13P55290 713 aa19.95■□□□□ 0.78
RTCA-201ENST00000260563 ARL13AQ5H913 290 aaPredicted RBP19.95■□□□□ 0.78
RTCA-201ENST00000260563 SNAP47Q5SQN1 464 aa19.95■□□□□ 0.78
RTCA-201ENST00000260563 PHF19Q5T6S3 580 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms