RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 LILRA3Q8N6C8 439 aaPredicted RBP13.13□□□□□ -0.31
VHL-201ENST00000256474 OR2T29Q8NH02 315 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 ITFG2Q969R8 447 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 SH3YL1Q96HL8 342 aaPredicted RBP13.13□□□□□ -0.31
VHL-201ENST00000256474 CASD1Q96PB1 797 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 ACAT2Q9BWD1 397 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 RHCGQ9UBD6 479 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 TET1Q8NFU7 2136 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 TRIM43BA6NCK2 446 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 ARNTLO00327 626 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 TRBC1P01850 177 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 MEF2AQ02078 507 aaPredicted RBP13.12□□□□□ -0.31
VHL-201ENST00000256474 STARD3Q14849 445 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 ADPRMQ3LIE5 342 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 MFSD4BQ5TF39 518 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 B3GNT8Q7Z7M8 397 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 BBS7Q8IWZ6 715 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 NXPE1Q8N323 547 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 ATP13A3Q9H7F0 1226 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 MAGEE1Q9HCI5 957 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 ACSL6Q9UKU0 697 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 SNX6Q9UNH7 406 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 TPRKBQ9Y3C4 175 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 FABP3P05413 133 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 ACPPP15309 386 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 SERPINA4P29622 427 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 HPCAL1P37235 193 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 DAPP51397 102 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 NKX2-5P52952 324 aaPredicted RBP13.12□□□□□ -0.31
VHL-201ENST00000256474 TRIM71Q2Q1W2 868 aaKnown RBP13.12□□□□□ -0.31
VHL-201ENST00000256474 HIPK1Q86Z02 1210 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 CACTIN-AS1Q8N1I8 211 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 GOLM1Q8NBJ4 401 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 SORCS1Q8WY21 1168 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 LAMP1P11279 417 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 XPAP23025 273 aaPredicted RBP13.12□□□□□ -0.31
VHL-201ENST00000256474 GANABQ14697 944 aaKnown RBP13.12□□□□□ -0.31
VHL-201ENST00000256474 SYTL3Q4VX76 610 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 NEK5Q6P3R8 708 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 Q6ZVU0 165 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 GTPBP3Q969Y2 492 aaKnown RBP13.12□□□□□ -0.31
VHL-201ENST00000256474 TMEM169Q96HH4 297 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 P2RY13Q9BPV8 354 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 SLC32A1Q9H598 525 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 CLMPQ9H6B4 373 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 RNF167Q9H6Y7 350 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 OGDHLQ9ULD0 1010 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 ERGIC3Q9Y282 383 aa13.12□□□□□ -0.31
VHL-201ENST00000256474 PIKFYVEQ9Y2I7 2098 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 KRBA1A5PL33 1030 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 IGSF6O95976 241 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 C7P10643 843 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 EPS8Q12929 822 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 DGKKQ5KSL6 1271 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.11□□□□□ -0.313e-13■■■■■ 34.8
VHL-201ENST00000256474 NELL1Q92832 810 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 PNMA8CA0A1B0GUJ8 204 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 DYTNA2CJ06 578 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 MGAT4DA6NG13 374 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 MAGEB17A8MXT2 336 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 KPNA4O00629 521 aaPredicted RBP13.11□□□□□ -0.31
VHL-201ENST00000256474 RGS10O43665 173 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 EBLN1P0CF75 366 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 ZNF12P17014 697 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 ALOX12P18054 663 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 GTF2E2P29084 291 aaKnown RBP13.11□□□□□ -0.31
VHL-201ENST00000256474 DAB2P98082 770 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 NOXRED1Q6NXP6 359 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 LSRQ86X29 649 aaPredicted RBP13.11□□□□□ -0.31
VHL-201ENST00000256474 NLGN4XQ8N0W4 816 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 SVOPLQ8N434 492 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 ZBTB8BQ8NAP8 495 aaPredicted RBP13.11□□□□□ -0.31
VHL-201ENST00000256474 MCFD2Q8NI22 146 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 ZNF641Q96N77 438 aaPredicted RBP13.11□□□□□ -0.31
VHL-201ENST00000256474 GORASP2Q9H8Y8 452 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 ZBTB20Q9HC78 741 aaPredicted RBP13.11□□□□□ -0.31
VHL-201ENST00000256474 C8orf4Q9NR00 106 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 THUMPD1Q9NXG2 353 aaKnown RBP13.11□□□□□ -0.31
VHL-201ENST00000256474 TMEM9Q9P0T7 183 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 CDH7Q9ULB5 785 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 TSC22D4Q9Y3Q8 395 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 CPNE6O95741 557 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 DNTTP04053 509 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 OR56A5P0C7T3 313 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 RRM2P31350 389 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 CREMQ03060 361 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 LMAN2Q12907 356 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 ZNF846Q147U1 533 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 DGUOKQ16854 277 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.11□□□□□ -0.31
VHL-201ENST00000256474 CPZQ66K79 652 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 LAIR1Q6GTX8 287 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 LAIR2Q6ISS4 152 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 ZNF551Q7Z340 670 aaPredicted RBP13.11□□□□□ -0.31
VHL-201ENST00000256474 SLC22A16Q86VW1 577 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 HJURPQ8NCD3 748 aaPredicted RBP13.11□□□□□ -0.31
VHL-201ENST00000256474 ADAMTS16Q8TE57 1224 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 FAR1Q8WVX9 515 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 APOL4Q9BPW4 351 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 BRD9Q9H8M2 597 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms