RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 MDC1Q14676 2089 aaKnown RBP20.13■□□□□ 0.81
NEDD8-201ENST00000250495 NUP210LQ5VU65 1888 aa20.13■□□□□ 0.81
NEDD8-201ENST00000250495 CNTRLQ7Z7A1 2325 aa20.13■□□□□ 0.81
NEDD8-201ENST00000250495 HIVEP3Q5T1R4 2406 aa20.12■□□□□ 0.81
NEDD8-201ENST00000250495 A0A1W2PPV9 198 aa20.12■□□□□ 0.81
NEDD8-201ENST00000250495 TCRBV7S3A2A0A539 114 aa20.12■□□□□ 0.81
NEDD8-201ENST00000250495 EIF2S1P05198 315 aaKnown RBP20.12■□□□□ 0.81
NEDD8-201ENST00000250495 MUM1Q2TAK8 710 aa20.12■□□□□ 0.81
NEDD8-201ENST00000250495 CRB2Q5IJ48 1285 aa20.12■□□□□ 0.81
NEDD8-201ENST00000250495 SHISA6Q6ZSJ9 500 aa20.12■□□□□ 0.81
NEDD8-201ENST00000250495 RNF44Q7L0R7 432 aa20.12■□□□□ 0.81
NEDD8-201ENST00000250495 METTL27Q8N6F8 245 aaPredicted RBP20.12■□□□□ 0.81
NEDD8-201ENST00000250495 COG1Q8WTW3 980 aa20.12■□□□□ 0.81
NEDD8-201ENST00000250495 WDR77Q9BQA1 342 aaPredicted RBP20.12■□□□□ 0.81
NEDD8-201ENST00000250495 DPH7Q9BTV6 452 aa20.12■□□□□ 0.81
NEDD8-201ENST00000250495 FAM114A2Q9NRY5 505 aa20.12■□□□□ 0.81
NEDD8-201ENST00000250495 CTSFQ9UBX1 484 aa20.12■□□□□ 0.81
NEDD8-201ENST00000250495 MAU2Q9Y6X3 613 aa20.12■□□□□ 0.81
NEDD8-201ENST00000250495 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.11■□□□□ 0.81
NEDD8-201ENST00000250495 LOC105369274A0A096LPK9 316 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 LOC102723532A0A0G2JNH3 316 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 MAGEB16A2A368 324 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 OR2A25A4D2G3 310 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 KRT87PA6NCN2 255 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 E5RI56 91 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 PHF2O75151 1096 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 ERVK-10P10266 1014 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 PKMP14618 531 aaKnown RBP20.11■□□□□ 0.81
NEDD8-201ENST00000250495 HSD17B2P37059 387 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 ELOAQ14241 798 aaKnown RBP20.11■□□□□ 0.81
NEDD8-201ENST00000250495 FASTKQ14296 549 aaKnown RBP20.11■□□□□ 0.81
NEDD8-201ENST00000250495 ARHGAP19Q14CB8 494 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 TRIP13Q15645 432 aaPredicted RBP20.11■□□□□ 0.81
NEDD8-201ENST00000250495 NEPROQ6NW34 567 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 FBXO42Q6P3S6 717 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 CASC4Q6P4E1 433 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 IGFL2Q6UWQ7 119 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 PARP9Q8IXQ6 854 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 OR4N4Q8N0Y3 316 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 PPP4R1Q8TF05 950 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 SMPDL3AQ92484 453 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 INPP5DQ92835 1189 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 FAM136AQ96C01 138 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 MIEF2Q96C03 454 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 ZFYVE21Q9BQ24 234 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 CRB3Q9BUF7 120 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 ACAT2Q9BWD1 397 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 LHPPQ9H008 270 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 MRPS30Q9NP92 439 aaKnown RBP20.11■□□□□ 0.81
NEDD8-201ENST00000250495 AGPAT4Q9NRZ5 378 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 UTP6Q9NYH9 597 aaKnown RBP20.11■□□□□ 0.81
NEDD8-201ENST00000250495 ZNF282Q9UDV7 671 aaPredicted RBP20.11■□□□□ 0.81
NEDD8-201ENST00000250495 TSR3Q9UJK0 312 aaKnown RBP20.11■□□□□ 0.81
NEDD8-201ENST00000250495 CDC14AQ9UNH5 594 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 PCDHGA10Q9Y5H3 936 aa20.11■□□□□ 0.81
NEDD8-201ENST00000250495 ZNF839A8K0R7 811 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 AVILO75366 819 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 VPS26AO75436 327 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 PSIP1O75475 530 aaKnown RBP20.1■□□□□ 0.81
NEDD8-201ENST00000250495 CATP04040 527 aaKnown RBP20.1■□□□□ 0.81
NEDD8-201ENST00000250495 ERGP11308 486 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 CXCR5P32302 372 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 RPA3P35244 121 aaPredicted RBP20.1■□□□□ 0.81
NEDD8-201ENST00000250495 MAGEA6P43360 314 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 TERF1P54274 439 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 EMP3P54852 163 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 GPS1Q13098 491 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 KCNJ11Q14654 390 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 KLHL38Q2WGJ6 581 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 ACSBG2Q5FVE4 666 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 CUZD1Q86UP6 607 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 CILP2Q8IUL8 1156 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 PRELID2Q8N945 189 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 OR11G2Q8NGC1 345 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 DNAJB14Q8TBM8 379 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 STT3BQ8TCJ2 826 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 EPS8L2Q9H6S3 715 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 INTS10Q9NVR2 710 aaKnown RBP20.1■□□□□ 0.81
NEDD8-201ENST00000250495 SAMD15Q9P1V8 674 aa20.1■□□□□ 0.81
NEDD8-201ENST00000250495 ANKUB1A6NFN9 424 aa20.09■□□□□ 0.81
NEDD8-201ENST00000250495 ESPNB1AK53 854 aa20.09■□□□□ 0.81
NEDD8-201ENST00000250495 MYO1CO00159 1063 aa20.09■□□□□ 0.81
NEDD8-201ENST00000250495 ALOX12BO75342 701 aa20.09■□□□□ 0.81
NEDD8-201ENST00000250495 ZGLP1P0C6A0 271 aa20.09■□□□□ 0.81
NEDD8-201ENST00000250495 VPS41P49754 854 aa20.09■□□□□ 0.81
NEDD8-201ENST00000250495 YBX1P67809 324 aaKnown RBP20.09■□□□□ 0.81
NEDD8-201ENST00000250495 KLC1Q07866 573 aa20.09■□□□□ 0.81
NEDD8-201ENST00000250495 HIF1AQ16665 826 aa20.09■□□□□ 0.81
NEDD8-201ENST00000250495 TTLL9Q3SXZ7 439 aa20.09■□□□□ 0.81
NEDD8-201ENST00000250495 NEK10Q6ZWH5 1172 aa20.09■□□□□ 0.81
NEDD8-201ENST00000250495 CENPUQ71F23 418 aa20.09■□□□□ 0.81
NEDD8-201ENST00000250495 THOC3Q96J01 351 aaKnown RBP20.09■□□□□ 0.81
NEDD8-201ENST00000250495 BARD1Q99728 777 aaKnown RBP20.09■□□□□ 0.81
NEDD8-201ENST00000250495 PLCD4Q9BRC7 762 aa20.09■□□□□ 0.81
NEDD8-201ENST00000250495 KLHL42Q9P2K6 505 aa20.09■□□□□ 0.81
NEDD8-201ENST00000250495 GALPQ9UBC7 116 aa20.09■□□□□ 0.81
NEDD8-201ENST00000250495 FAM237BA0A1B0GVD1 139 aa20.08■□□□□ 0.81
NEDD8-201ENST00000250495 CTAGE9A4FU28 777 aa20.08■□□□□ 0.81
NEDD8-201ENST00000250495 SDR42E2A6NKP2 422 aa20.08■□□□□ 0.81
NEDD8-201ENST00000250495 ARHGEF33A8MVX0 844 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms