RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 PRAMEF13Q5VWM6 474 aa14.71□□□□□ -0.06
HDHD3-201ENST00000238379 ATG9BQ674R7 924 aa14.71□□□□□ -0.06
HDHD3-201ENST00000238379 CYP20A1Q6UW02 462 aa14.71□□□□□ -0.06
HDHD3-201ENST00000238379 LCTLQ6UWM7 567 aa14.71□□□□□ -0.06
HDHD3-201ENST00000238379 WASH2PQ6VEQ5 465 aa14.71□□□□□ -0.06
HDHD3-201ENST00000238379 C2orf73Q8N5S3 287 aaPredicted RBP14.71□□□□□ -0.06
HDHD3-201ENST00000238379 PROKR1Q8TCW9 393 aa14.71□□□□□ -0.06
HDHD3-201ENST00000238379 TMEM168Q9H0V1 697 aa14.71□□□□□ -0.06
HDHD3-201ENST00000238379 EHD1Q9H4M9 534 aa14.71□□□□□ -0.06
HDHD3-201ENST00000238379 ACTL8Q9H568 366 aa14.71□□□□□ -0.06
HDHD3-201ENST00000238379 DENND2DQ9H6A0 471 aaPredicted RBP14.71□□□□□ -0.06
HDHD3-201ENST00000238379 WASH6PQ9NQA3 447 aa14.71□□□□□ -0.06
HDHD3-201ENST00000238379 GPR27Q9NS67 375 aa14.71□□□□□ -0.06
HDHD3-201ENST00000238379 ASIC5Q9NY37 505 aa14.71□□□□□ -0.06
HDHD3-201ENST00000238379 PCDHGA11Q9Y5H2 935 aa14.71□□□□□ -0.06
HDHD3-201ENST00000238379 C9JVG2 144 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 NR5A2O00482 541 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 EML2O95834 649 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 CAPN3P20807 821 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 AK4P27144 223 aaPredicted RBP14.7□□□□□ -0.06
HDHD3-201ENST00000238379 ART3Q13508 389 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 RPE65Q16518 533 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 THEMIS2Q5TEJ8 643 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 REP15Q6BDI9 236 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 PGM2L1Q6PCE3 622 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 C16orf89Q6UX73 402 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 GJD3Q8N144 294 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 RNF175Q8N4F7 328 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 OR7G3Q8NG95 312 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 CCL4L1Q8NHW4 92 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 TSPEARQ8WU66 669 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 SLC5A11Q8WWX8 675 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 HAUS8Q9BT25 410 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 MVB12BQ9H7P6 319 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 TRNAU1APQ9NX07 287 aaKnown RBP14.7□□□□□ -0.06
HDHD3-201ENST00000238379 SLC7A8Q9UHI5 535 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 PCOLCE2Q9UKZ9 415 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 POLR3HQ9Y535 204 aaPredicted RBP14.7□□□□□ -0.06
HDHD3-201ENST00000238379 SLCO1B1Q9Y6L6 691 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 DGKBQ9Y6T7 804 aa14.7□□□□□ -0.06
HDHD3-201ENST00000238379 A0A1W2PPV9 198 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 ZNF839A8K0R7 811 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 RASGRP1O95267 797 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 MTHFD1P11586 935 aaKnown RBP14.69□□□□□ -0.06
HDHD3-201ENST00000238379 IL12AP29459 219 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 RPS9P46781 194 aaKnown RBP14.69□□□□□ -0.06
HDHD3-201ENST00000238379 TBL3Q12788 808 aaKnown RBP14.69□□□□□ -0.06
HDHD3-201ENST00000238379 CSTF3Q12996 717 aaKnown RBP14.69□□□□□ -0.06
HDHD3-201ENST00000238379 MTAPQ13126 283 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 RCAN2Q14206 197 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 MMEL1Q495T6 779 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 VPS26BQ4G0F5 336 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 ADNP2Q6IQ32 1131 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 NXPE4Q6UWF7 544 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 RETREG3Q86VR2 466 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 HID1Q8IV36 788 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 PGAM4Q8N0Y7 254 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 LINC01555Q8NAE3 123 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 SMPDL3AQ92484 453 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 CMTM7Q96FZ5 175 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 EFCAB11Q9BUY7 163 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 WDR41Q9HAD4 459 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 SPATA6Q9NWH7 488 aaPredicted RBP14.69□□□□□ -0.06
HDHD3-201ENST00000238379 GEMIN8Q9NWZ8 242 aaKnown RBP14.69□□□□□ -0.06
HDHD3-201ENST00000238379 NDE1Q9NXR1 346 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 EIF3LQ9Y262 564 aaKnown RBP14.69□□□□□ -0.06
HDHD3-201ENST00000238379 PRAMEF33A0A0G2JMD5 474 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 BBIP1A8MTZ0 92 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 STK25O00506 426 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 MRASO14807 208 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 YBX1P67809 324 aaKnown RBP14.69□□□□□ -0.06
HDHD3-201ENST00000238379 TCEA2Q15560 299 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 WASHC2DQ5SRD0 308 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 MED27Q6P2C8 311 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 NRROSQ86YC3 692 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 PARP9Q8IXQ6 854 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 LAS2Q8IYD9 372 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 CAMKK1Q8N5S9 505 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 MTERF1Q99551 399 aaKnown RBP14.69□□□□□ -0.06
HDHD3-201ENST00000238379 ACAT2Q9BWD1 397 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 CAAP1Q9H8G2 361 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 THEGQ9P2T0 379 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 TAC3Q9UHF0 121 aa14.69□□□□□ -0.06
HDHD3-201ENST00000238379 SPTY2D1-AS1A0A0U1RR47 76 aa14.68□□□□□ -0.06
HDHD3-201ENST00000238379 A6NCN8 305 aa14.68□□□□□ -0.06
HDHD3-201ENST00000238379 METTL12A8MUP2 240 aa14.68□□□□□ -0.06
HDHD3-201ENST00000238379 THEGLP0DJG4 465 aa14.68□□□□□ -0.06
HDHD3-201ENST00000238379 HSD3B1P14060 373 aa14.68□□□□□ -0.06
HDHD3-201ENST00000238379 HSD3B2P26439 372 aa14.68□□□□□ -0.06
HDHD3-201ENST00000238379 PKLRP30613 574 aa14.68□□□□□ -0.06
HDHD3-201ENST00000238379 ACTR1BP42025 376 aa14.68□□□□□ -0.06
HDHD3-201ENST00000238379 DPP6P42658 865 aa14.68□□□□□ -0.06
HDHD3-201ENST00000238379 RAB28P51157 221 aa14.68□□□□□ -0.06
HDHD3-201ENST00000238379 POLR2JP52435 117 aaKnown RBP14.68□□□□□ -0.06
HDHD3-201ENST00000238379 ACTR1AP61163 376 aa14.68□□□□□ -0.06
HDHD3-201ENST00000238379 EIF2B5Q13144 721 aaKnown RBP14.68□□□□□ -0.06
HDHD3-201ENST00000238379 SLBPQ14493 270 aaKnown RBP eCLIP14.68□□□□□ -0.06
HDHD3-201ENST00000238379 KRT33BQ14525 404 aa14.68□□□□□ -0.06
HDHD3-201ENST00000238379 USP39Q53GS9 565 aaKnown RBP14.68□□□□□ -0.06
HDHD3-201ENST00000238379 PAGE2BQ5JRK9 111 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms