RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 LHX9Q9NQ69 397 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 IRAK4Q9NWZ3 460 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 UTP6Q9NYH9 597 aaKnown RBP12.18□□□□□ -0.46
LSM5-201ENST00000223084 EURLQ9NYK6 297 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 PADI1Q9ULC6 663 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 PLCL2Q9UPR0 1127 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 PCDHB3Q9Y5E6 796 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 PCDHGA4Q9Y5G9 962 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 MRPS18BQ9Y676 258 aaKnown RBP12.18□□□□□ -0.46
LSM5-201ENST00000223084 MDC1Q14676 2089 aaKnown RBP12.18□□□□□ -0.46
LSM5-201ENST00000223084 GCN1Q92616 2671 aaKnown RBP12.18□□□□□ -0.46
LSM5-201ENST00000223084 ITPR1Q14643 2758 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 IGKV1-8A0A0C4DH67 115 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 A0A0J9YVX5 310 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 ZNF839A8K0R7 811 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 TARM1B6A8C7 271 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 H3BMH7 237 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 FKBP9O95302 570 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 WISP3O95389 354 aaPredicted RBP12.17□□□□□ -0.46
LSM5-201ENST00000223084 GUCA1CO95843 209 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 HIST1H2AGP0C0S8 130 aaPredicted RBP12.17□□□□□ -0.46
LSM5-201ENST00000223084 CCNYL3P0C7X3 344 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 STMN1P16949 149 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 HIST1H2ADP20671 130 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 DEKP35659 375 aaKnown RBP12.17□□□□□ -0.46
LSM5-201ENST00000223084 DLSTP36957 453 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 TBPL1P62380 186 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 PRDX1Q06830 199 aaKnown RBP12.17□□□□□ -0.46
LSM5-201ENST00000223084 NAE1Q13564 534 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 BMPR2Q13873 1038 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 SLMAPQ14BN4 828 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 UAP1Q16222 522 aaPredicted RBP12.17□□□□□ -0.46
LSM5-201ENST00000223084 ZXDCQ2QGD7 858 aaPredicted RBP12.17□□□□□ -0.46
LSM5-201ENST00000223084 THEMIS2Q5TEJ8 643 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 ICE2Q659A1 982 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 AGTRAPQ6RW13 159 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 SBSNQ6UWP8 590 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 CEP128Q6ZU80 1094 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 CMC1Q7Z7K0 106 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 GSPT2Q8IYD1 628 aaKnown RBP12.17□□□□□ -0.46
LSM5-201ENST00000223084 GPR135Q8IZ08 494 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 ZNF655Q8N720 491 aaPredicted RBP12.17□□□□□ -0.46
LSM5-201ENST00000223084 CT55Q8WUE5 264 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 MR1Q95460 341 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 KIAA1143Q96AT1 154 aaPredicted RBP12.17□□□□□ -0.46
LSM5-201ENST00000223084 CLIP3Q96DZ5 547 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 MED8Q96G25 268 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 HIST1H2AHQ96KK5 128 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 HIST1H2AJQ99878 128 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 H2AFJQ9BTM1 129 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 SLC7A5P2Q9GIP4 190 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 ACTR5Q9H9F9 607 aaPredicted RBP12.17□□□□□ -0.46
LSM5-201ENST00000223084 POPDC3Q9HBV1 291 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 STARD5Q9NSY2 213 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 CUEDC1Q9NWM3 386 aaPredicted RBP12.17□□□□□ -0.46
LSM5-201ENST00000223084 ARL15Q9NXU5 204 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 SH2B3Q9UQQ2 575 aa12.17□□□□□ -0.46
LSM5-201ENST00000223084 CCDC88CQ9P219 2028 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 NBEAQ8NFP9 2946 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 LOC105369274A0A096LPK9 316 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 LOC102723532A0A0G2JNH3 316 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 OR2A25A4D2G3 310 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 TERTO14746 1132 aaKnown RBP12.16□□□□□ -0.46
LSM5-201ENST00000223084 NKX2-8O15522 239 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 KATNA1O75449 491 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 MT-ND3P03897 115 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 FAM153BP0C7A2 387 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 CCDC166P0CW27 439 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 TCN2P20062 427 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 PHBP35232 272 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 RORAP35398 523 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 RAB10P61026 200 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 NAB1Q13506 487 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 TSNQ15631 228 aaKnown RBP12.16□□□□□ -0.46
LSM5-201ENST00000223084 PTCHD3Q3KNS1 767 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 FAM153CQ494X1 144 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 ZC3H12BQ5HYM0 836 aaKnown RBP12.16□□□□□ -0.46
LSM5-201ENST00000223084 MROH9Q5TGP6 573 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 C1orf189Q5VU69 101 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 FRMPD2BQ6IN97 320 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 FBXO42Q6P3S6 717 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 OR4N4Q8N0Y3 316 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 TSPAN17Q96FV3 270 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 CYTH2Q99418 400 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 SELENOSQ9BQE4 189 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 PLCD4Q9BRC7 762 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 TRIM54Q9BYV2 358 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 TSPYL1Q9H0U9 437 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 CHST8Q9H2A9 424 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 ACSS3Q9H6R3 686 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 SYNPO2LQ9H987 977 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 CCDC177Q9NQR7 707 aaPredicted RBP12.16□□□□□ -0.46
LSM5-201ENST00000223084 PCMTD2Q9NV79 361 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 DHCR7Q9UBM7 475 aaKnown RBP12.16□□□□□ -0.46
LSM5-201ENST00000223084 CTNNAL1Q9UBT7 734 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 KLK4Q9Y5K2 254 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 MAST4O15021 2626 aa12.16□□□□□ -0.46
LSM5-201ENST00000223084 HMX2A2RU54 273 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 PABPN1LA6NDY0 278 aaKnown RBP12.15□□□□□ -0.46
LSM5-201ENST00000223084 H7BY64 318 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms