RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 RPF2Q9H7B2 306 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 TLE6Q9H808 572 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 MARCH7Q9H992 704 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 FOLH1BQ9HBA9 442 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ACP6Q9NPH0 428 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 LYARQ9NX58 379 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 HECAQ9UBI9 543 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 PLEKHA6Q9Y2H5 1048 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 INMTO95050 263 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 GRK6P43250 576 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 MAGEA2P43356 314 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 AVPR1BP47901 424 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 LEPRP48357 1165 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 STC1P52823 247 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ZMYND11Q15326 602 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 SLC22A10Q63ZE4 541 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TCEAL6Q6IPX3 200 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ZNF563Q8TA94 476 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 SLC7A6OSQ96CW6 309 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 RNF31Q96EP0 1072 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 PCED1BQ96HM7 432 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ZNF354BQ96LW1 612 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 FERD3LQ96RJ6 166 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 SLC35A5Q9BS91 424 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TXLNGYQ9BZA5 131 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 NLE1Q9NVX2 485 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 ZNF224Q9NZL3 707 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 GPN3Q9UHW5 284 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 PPM1HQ9ULR3 514 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ABCG2Q9UNQ0 655 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 IFT52Q9Y366 437 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 HCN4Q9Y3Q4 1203 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 FKBP7Q9Y680 259 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ZFC3H1O60293 1989 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 ABHD14A-ACY1A0A1B0GW23 586 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ARL5CA6NH57 179 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 A8MT66 165 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CENPBD1B2RD01 187 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 FAAHO00519 579 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 KMOO15229 486 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 LRRTM2O43300 516 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 UGDHO60701 494 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ATP6AP2O75787 350 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 KAT7O95251 611 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 MT-ND5P03915 603 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 PVALBP20472 110 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 LCN1P31025 176 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 SMAD3P84022 425 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 CCNIQ14094 377 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 SEC23BQ15437 767 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 WSCD2Q2TBF2 565 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 LCN8Q6JVE9 175 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 REEP3Q6NUK4 255 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 PAOXQ6QHF9 649 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 LBX2Q6XYB7 198 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 C16orf59Q7L2K0 433 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 NUP54Q7Z3B4 507 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CCDC28AQ8IWP9 274 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TOMM5Q8N4H5 51 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 DNASE1L2Q92874 299 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TMBIM1Q969X1 311 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 RAD51AP1Q96B01 352 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CHFRQ96EP1 664 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 POLR2J2Q9GZM3 115 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 SLA2Q9H6Q3 261 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TAS2R8Q9NYW2 309 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 UBQLN2Q9UHD9 624 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 DICER1Q9UPY3 1922 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 DAPL1A0PJW8 107 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 VNN1O95497 513 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 UGT2B10P36537 528 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 BLKP51451 505 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 PRMT2P55345 433 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 DSTNP60981 165 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ABATP80404 500 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CD47Q08722 323 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CHIT1Q13231 466 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 SLC9A5Q14940 896 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 EIF4HQ15056 248 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 PAN2Q504Q3 1202 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 SH3D19Q5HYK7 790 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CXorf57Q6NSI4 855 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 RALGPS2Q86X27 583 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 POF1BQ8WVV4 589 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 CLEC4DQ8WXI8 215 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 IFT27Q9BW83 186 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 MEPEQ9NQ76 525 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 ZFP57Q9NU63 452 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TMEM184CQ9NVA4 438 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 ZDHHC7Q9NXF8 308 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 PTTG3PQ9NZH4 202 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TNFRSF10DQ9UBN6 386 aa4.31□□□□□ -1.72
CHD9-201ENST00000219084 TMA7Q9Y2S6 64 aaKnown RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 TIMM13Q9Y5L4 95 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 SPIN1Q9Y657 262 aaPredicted RBP4.31□□□□□ -1.72
CHD9-201ENST00000219084 ADAMTS7Q9UKP4 1686 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 TBC1D3BA6NDS4 549 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 PHYHO14832 338 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 ECI2O75521 394 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 CNTN5O94779 1100 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms