RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 TMEM98Q9Y2Y6 226 aa28.75■■■□□ 2.19
PABPN1-201ENST00000216727 MYO9BQ13459 2157 aa28.75■■■□□ 2.19
PABPN1-201ENST00000216727 PRMT3O60678 531 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 OXTRP30559 389 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 CDK3Q00526 305 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 WSCD2Q2TBF2 565 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 RUNDC3AQ59EK9 446 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 LRIF1Q5T3J3 769 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP28.74■■■□□ 2.19
PABPN1-201ENST00000216727 AMIGO2Q86SJ2 522 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 NEIL2Q969S2 332 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 WDR34Q96EX3 536 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 CCDC115Q96NT0 180 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 OSBPL6Q9BZF3 934 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 ZDHHC5Q9C0B5 715 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 RMND5AQ9H871 391 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 AGPAT4Q9NRZ5 378 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 SLC25A37Q9NYZ2 338 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 DLGAP2Q9P1A6 1054 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 USP22Q9UPT9 525 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 C2orf27AQ580R0 203 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 RNF175Q8N4F7 328 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 C11orf24Q96F05 449 aaPredicted RBP28.74■■■□□ 2.19
PABPN1-201ENST00000216727 MTERF1Q99551 399 aaKnown RBP28.74■■■□□ 2.19
PABPN1-201ENST00000216727 COQ10BQ9H8M1 238 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 SERHLQ9NQF3 203 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 NIPSNAP3AQ9UFN0 247 aaPredicted RBP28.74■■■□□ 2.19
PABPN1-201ENST00000216727 PPT2Q9UMR5 302 aa28.74■■■□□ 2.19
PABPN1-201ENST00000216727 RUVBL1Q9Y265 456 aaKnown RBP28.74■■■□□ 2.19
PABPN1-201ENST00000216727 TXNDC9O14530 226 aa28.73■■■□□ 2.19
PABPN1-201ENST00000216727 PCCBP05166 539 aa28.73■■■□□ 2.19
PABPN1-201ENST00000216727 FCGR1AP12314 374 aa28.73■■■□□ 2.19
PABPN1-201ENST00000216727 PRPS1L1P21108 318 aa28.73■■■□□ 2.19
PABPN1-201ENST00000216727 GALK1P51570 392 aa28.73■■■□□ 2.19
PABPN1-201ENST00000216727 HNRNPFP52597 415 aaKnown RBP28.73■■■□□ 2.19
PABPN1-201ENST00000216727 CYP4F3Q08477 520 aa28.73■■■□□ 2.19
PABPN1-201ENST00000216727 PDK3Q15120 406 aa28.73■■■□□ 2.19
PABPN1-201ENST00000216727 DPY19L1Q2PZI1 675 aa28.73■■■□□ 2.19
PABPN1-201ENST00000216727 GLYATQ6IB77 296 aa28.73■■■□□ 2.19
PABPN1-201ENST00000216727 FAM83HQ6ZRV2 1179 aaPredicted RBP28.73■■■□□ 2.19
PABPN1-201ENST00000216727 AMZ2Q86W34 360 aa28.73■■■□□ 2.19
PABPN1-201ENST00000216727 LRRC56Q8IYG6 542 aaPredicted RBP28.73■■■□□ 2.19
PABPN1-201ENST00000216727 GALNT4Q8N4A0 578 aa28.73■■■□□ 2.19
PABPN1-201ENST00000216727 FAM110BQ8TC76 370 aa28.73■■■□□ 2.19
PABPN1-201ENST00000216727 ANAPC2Q9UJX6 822 aa28.73■■■□□ 2.19
PABPN1-201ENST00000216727 PCYT1BQ9Y5K3 369 aaPredicted RBP28.73■■■□□ 2.19
PABPN1-201ENST00000216727 REV3LO60673 3130 aa28.73■■■□□ 2.19
PABPN1-201ENST00000216727 A0A096LPI6 279 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 PCDH8O95206 1070 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 NPPBP16860 134 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 FASP25445 335 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 KIR2DL1P43626 348 aaPredicted RBP28.72■■■□□ 2.19
PABPN1-201ENST00000216727 C10orf62Q5T681 223 aaPredicted RBP28.72■■■□□ 2.19
PABPN1-201ENST00000216727 OR7G3Q8NG95 312 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 ITCHQ96J02 903 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 ZNF597Q96LX8 424 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 PAIP1Q9H074 479 aaKnown RBP28.72■■■□□ 2.19
PABPN1-201ENST00000216727 PIF1Q9H611 641 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 AP4B1Q9Y6B7 739 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 DNMT3AQ9Y6K1 912 aaPredicted RBP28.72■■■□□ 2.19
PABPN1-201ENST00000216727 TEAD1P28347 426 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 SOX9P48436 509 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 C21orf58P58505 322 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 PDZD3Q86UT5 571 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 LRRTM4Q86VH4 590 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 HDDC3Q8N4P3 179 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 OXR1Q8N573 874 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 DTWD1Q8N5C7 304 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 TNIP2Q8NFZ5 429 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 REPS1Q96D71 796 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 NSMCE2Q96MF7 247 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 RIPOR3Q96MK2 946 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 EHD1Q9H4M9 534 aa28.72■■■□□ 2.19
PABPN1-201ENST00000216727 TRPM6Q9BX84 2022 aa28.71■■■□□ 2.19
PABPN1-201ENST00000216727 K7EQS6 105 aa28.71■■■□□ 2.19
PABPN1-201ENST00000216727 GGT1P19440 569 aa28.71■■■□□ 2.19
PABPN1-201ENST00000216727 TAP2Q03519 686 aa28.71■■■□□ 2.19
PABPN1-201ENST00000216727 MTAPQ13126 283 aa28.71■■■□□ 2.19
PABPN1-201ENST00000216727 CACUL1Q86Y37 369 aa28.71■■■□□ 2.19
PABPN1-201ENST00000216727 BIRC7Q96CA5 298 aa28.71■■■□□ 2.19
PABPN1-201ENST00000216727 EGLN2Q96KS0 407 aa28.71■■■□□ 2.19
PABPN1-201ENST00000216727 THUMPD3Q9BV44 507 aaKnown RBP28.71■■■□□ 2.19
PABPN1-201ENST00000216727 DYRK1BQ9Y463 629 aa28.71■■■□□ 2.19
PABPN1-201ENST00000216727 ACSM2AQ08AH3 577 aa28.7■■■□□ 2.19
PABPN1-201ENST00000216727 DDX39BQ13838 428 aaKnown RBP28.7■■■□□ 2.19
PABPN1-201ENST00000216727 ACSM2BQ68CK6 577 aa28.7■■■□□ 2.19
PABPN1-201ENST00000216727 MED27Q6P2C8 311 aa28.7■■■□□ 2.19
PABPN1-201ENST00000216727 GPR180Q86V85 440 aa28.7■■■□□ 2.19
PABPN1-201ENST00000216727 APLFQ8IW19 511 aaPredicted RBP28.7■■■□□ 2.19
PABPN1-201ENST00000216727 TBC1D21Q8IYX1 336 aa28.7■■■□□ 2.19
PABPN1-201ENST00000216727 OR2T12Q8NG77 320 aa28.7■■■□□ 2.19
PABPN1-201ENST00000216727 EFCAB11Q9BUY7 163 aa28.7■■■□□ 2.19
PABPN1-201ENST00000216727 TEX101Q9BY14 249 aa28.7■■■□□ 2.19
PABPN1-201ENST00000216727 SERGEFQ9UGK8 458 aa28.7■■■□□ 2.19
PABPN1-201ENST00000216727 DPPA5A6NC42 116 aa28.7■■■□□ 2.18
PABPN1-201ENST00000216727 MAGEB17A8MXT2 336 aa28.7■■■□□ 2.18
PABPN1-201ENST00000216727 HOXB9P17482 250 aaPredicted RBP28.7■■■□□ 2.18
PABPN1-201ENST00000216727 STARD3Q14849 445 aa28.7■■■□□ 2.18
PABPN1-201ENST00000216727 ATG9BQ674R7 924 aa28.7■■■□□ 2.18
PABPN1-201ENST00000216727 ZNF776Q68DI1 518 aaPredicted RBP28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms