RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 MED25Q71SY5 747 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 MRGPREQ86SM8 312 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 KCNMB4Q86W47 210 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 OR8K5Q8NH50 307 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 OR2W6PQ8NHA6 318 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 GABPB2Q8TAK5 448 aaPredicted RBP9.68□□□□□ -0.86
PHGDH-222ENST00000641587 CDKL2Q92772 493 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 HDAC10Q969S8 669 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 ZBTB9Q96C00 473 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 CERS2Q96G23 380 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 SGSM3Q96HU1 749 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 ZCCHC2Q9C0B9 1178 aaKnown RBP9.68□□□□□ -0.86
PHGDH-222ENST00000641587 EPB41L4BQ9H329 900 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 ACBD3Q9H3P7 528 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 FANCEQ9HB96 536 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 TREX1Q9NSU2 369 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 NLE1Q9NVX2 485 aaPredicted RBP9.68□□□□□ -0.86
PHGDH-222ENST00000641587 IL1RAPL1Q9NZN1 696 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 SRPK3Q9UPE1 567 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 B3GNT3Q9Y2A9 372 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 IKBKGQ9Y6K9 419 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 FAM169AQ9Y6X4 670 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 POLEQ07864 2286 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 SVILO95425 2214 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 SNRNP200O75643 2136 aaKnown RBP9.67□□□□□ -0.86
PHGDH-222ENST00000641587 PCM1Q15154 2024 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 ZCWPW2A0A1B0GU75 182 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 MGAT4DA6NG13 374 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 OR51F1A6NGY5 319 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 GOLGA8KD6RF30 607 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 POC1B-GALNT4F8VUJ3 575 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 GOLGA8TH3BQL2 631 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 BTN3A3O00478 584 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 BTN3A1O00481 513 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 ZNF749O43361 778 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 HCRTR1O43613 425 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 CNOT3O75175 753 aaKnown RBP9.67□□□□□ -0.86
PHGDH-222ENST00000641587 KLF7O75840 302 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-222ENST00000641587 PRAMEF1O95521 474 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 SHBGP04278 402 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 CTSBP07858 339 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 SLC35G4P0C7Q5 338 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 CBSLP0DN79 551 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 ERVK-10P10266 1014 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 MSH3P20585 1137 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 CBSP35520 551 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 RRADP55042 308 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 MGAT5Q09328 741 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 KBTBD12Q3ZCT8 623 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 CRB2Q5IJ48 1285 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 C1orf189Q5VU69 101 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 AFTPHQ6ULP2 937 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 CDHR3Q6ZTQ4 885 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 CUZD1Q86UP6 607 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 HPS6Q86YV9 775 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 PPM1NQ8N819 430 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 OR13J1Q8NGT2 312 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 CYTH2Q99418 400 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 FAM167BQ9BTA0 163 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 SLC7A5P2Q9GIP4 190 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 ILKAPQ9H0C8 392 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-222ENST00000641587 ACSS3Q9H6R3 686 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 ZNF552Q9H707 407 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-222ENST00000641587 PLAC1Q9HBJ0 212 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 C1GALT1Q9NS00 363 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 IARS2Q9NSE4 1012 aaKnown RBP9.67□□□□□ -0.86
PHGDH-222ENST00000641587 ZFATQ9P243 1243 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 TXNDC16Q9P2K2 825 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 FKBPLQ9UIM3 349 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 RIMKLBQ9ULI2 386 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 DNMT3AQ9Y6K1 912 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-222ENST00000641587 DOCK10Q96BY6 2186 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 ZGRF1Q86YA3 2104 aa9.67□□□□□ -0.86
PHGDH-222ENST00000641587 NUP210LQ5VU65 1888 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 TLDC2A0PJX2 215 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 ARHGAP10A1A4S6 786 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 CCDC162PA2VCL2 907 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 C9J4A7 227 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 E7EQ34 232 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 ALOX12BO75342 701 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 PIAS1O75925 651 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 GOT2P00505 430 aaKnown RBP9.66□□□□□ -0.86
PHGDH-222ENST00000641587 NUDT17P0C025 328 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 VARSP26640 1264 aaKnown RBP9.66□□□□□ -0.86
PHGDH-222ENST00000641587 PRDX3P30048 256 aaKnown RBP9.66□□□□□ -0.86
PHGDH-222ENST00000641587 MC4RP32245 332 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 MSH2P43246 934 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 GLRBP48167 497 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 EIF3BP55884 814 aaKnown RBP9.66□□□□□ -0.86
PHGDH-222ENST00000641587 PRKAA1Q13131 559 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 ITGA9Q13797 1035 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 KRT33BQ14525 404 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 MYBPC3Q14896 1274 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 KRT71Q3SY84 523 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 FASTKD1Q53R41 847 aaKnown RBP9.66□□□□□ -0.86
PHGDH-222ENST00000641587 HSP90AA5PQ58FG0 334 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 CEP85LQ5SZL2 805 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 MLIPQ5VWP3 458 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 ZNF470Q6ECI4 717 aa9.66□□□□□ -0.86
PHGDH-222ENST00000641587 LRIG3Q6UXM1 1119 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms