RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ICAM2P13598 275 aa17.25■□□□□ 0.35
CLN6-212ENST00000636020 MYBPHQ13203 477 aa17.25■□□□□ 0.35
CLN6-212ENST00000636020 WASHC2DQ5SRD0 308 aa17.25■□□□□ 0.35
CLN6-212ENST00000636020 FIGLAQ6QHK4 219 aa17.25■□□□□ 0.35
CLN6-212ENST00000636020 MARVELD2Q8N4S9 558 aa17.25■□□□□ 0.35
CLN6-212ENST00000636020 TAB3Q8N5C8 712 aaPredicted RBP17.25■□□□□ 0.35
CLN6-212ENST00000636020 OR5K2Q8NHB8 316 aa17.25■□□□□ 0.35
CLN6-212ENST00000636020 ASB5Q8WWX0 329 aa17.25■□□□□ 0.35
CLN6-212ENST00000636020 SCMH1Q96GD3 660 aa17.25■□□□□ 0.35
CLN6-212ENST00000636020 IMMP1LQ96LU5 166 aa17.25■□□□□ 0.35
CLN6-212ENST00000636020 SIGLEC12Q96PQ1 595 aa17.25■□□□□ 0.35
CLN6-212ENST00000636020 HES7Q9BYE0 225 aa17.25■□□□□ 0.35
CLN6-212ENST00000636020 UCK2Q9BZX2 261 aa17.25■□□□□ 0.35
CLN6-212ENST00000636020 LUC7LQ9NQ29 371 aaKnown RBP17.25■□□□□ 0.35
CLN6-212ENST00000636020 KLHL1Q9NR64 748 aa17.25■□□□□ 0.35
CLN6-212ENST00000636020 STAB1Q9NY15 2570 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 HYKKA2RU49 373 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 C2orf81A6NN90 581 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 AP2A1O95782 977 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 GSTM1P09488 218 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 VSX2P58304 361 aaPredicted RBP17.24■□□□□ 0.35
CLN6-212ENST00000636020 GSTM4Q03013 218 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 TAF1AQ15573 450 aaPredicted RBP17.24■□□□□ 0.35
CLN6-212ENST00000636020 TMEM198Q66K66 360 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 CEP128Q6ZU80 1094 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 IPMKQ8NFU5 416 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 ARSGQ96EG1 525 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 ALPK1Q96QP1 1244 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 KCNJ16Q9NPI9 418 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 ZNF358Q9NW07 568 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 ZDHHC3Q9NYG2 299 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 MKL2Q9ULH7 1088 aa17.24■□□□□ 0.35
CLN6-212ENST00000636020 FAM90A27PA6NNH2 459 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 ZNF487B1APH4 448 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 APOL1O14791 398 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 PROM1O43490 865 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 SRPX2O60687 465 aaPredicted RBP17.23■□□□□ 0.35
CLN6-212ENST00000636020 PROSCO94903 275 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 FBLP22087 321 aaKnown RBP17.23■□□□□ 0.35
CLN6-212ENST00000636020 EEF1DP29692 281 aaKnown RBP17.23■□□□□ 0.35
CLN6-212ENST00000636020 CHRNB4P30926 498 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 WASHC5Q12768 1159 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 TUBA3CQ13748 450 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 DSG2Q14126 1118 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 TUBA3EQ6PEY2 450 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 SNX20Q7Z614 316 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 CLDN19Q8N6F1 224 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 LINC01555Q8NAE3 123 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.23■□□□□ 0.35
CLN6-212ENST00000636020 FCRL5Q96RD9 977 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 SLC24A3Q9HC58 644 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 INTS7Q9NVH2 962 aaKnown RBP17.23■□□□□ 0.35
CLN6-212ENST00000636020 RNF6Q9Y252 685 aa17.23■□□□□ 0.35
CLN6-212ENST00000636020 SCN2AQ99250 2005 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 RCCD1A6NED2 376 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 A8MUI8 341 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 LIN7AO14910 233 aaPredicted RBP17.22■□□□□ 0.35
CLN6-212ENST00000636020 CTSVO60911 334 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 CTAG2O75638 210 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 ITGALP20701 1170 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 DNASE1P24855 282 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 PKLRP30613 574 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 MEOX1P50221 254 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 BEST3Q8N1M1 668 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 LMNTD1Q8N9Z9 388 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 OR13C4Q8NGS5 318 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 HDAC10Q969S8 669 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 SLC22A18Q96BI1 424 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.22■□□□□ 0.35
CLN6-212ENST00000636020 STOX2Q9P2F5 926 aaPredicted RBP17.22■□□□□ 0.35
CLN6-212ENST00000636020 HRH3Q9Y5N1 445 aa17.22■□□□□ 0.35
CLN6-212ENST00000636020 LRRD1A4D1F6 860 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 C5orf60A6NFR6 353 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 C3orf70A6NLC5 250 aaPredicted RBP17.21■□□□□ 0.35
CLN6-212ENST00000636020 KDM1AO60341 852 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 AGTP01019 485 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 HEXBP07686 556 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 CD96P40200 585 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 CDKN1CP49918 316 aaPredicted RBP17.21■□□□□ 0.35
CLN6-212ENST00000636020 MPP3Q13368 585 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 GPR33Q49SQ1 333 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 ACER2Q5QJU3 275 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 FRMPD2BQ6IN97 320 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 H3F3CQ6NXT2 135 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 TMEM205Q6UW68 189 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 CXXC5Q7LFL8 322 aaKnown RBP17.21■□□□□ 0.35
CLN6-212ENST00000636020 C2orf73Q8N5S3 287 aaPredicted RBP17.21■□□□□ 0.35
CLN6-212ENST00000636020 ZNF354BQ96LW1 612 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 TUBB6Q9BUF5 446 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 MENTQ9BUN1 341 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 FICDQ9BVA6 458 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 POLDIP3Q9BY77 421 aaKnown RBP17.21■□□□□ 0.35
CLN6-212ENST00000636020 ZC3H7BQ9UGR2 993 aaKnown RBP17.21■□□□□ 0.35
CLN6-212ENST00000636020 PLEKHA6Q9Y2H5 1048 aa17.21■□□□□ 0.35
CLN6-212ENST00000636020 TRBV5-4A0A0C4DH59 114 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 FFAR3O14843 346 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 GPR42O15529 346 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 S1PR4O95977 384 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 CD46P15529 392 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 ZFXP17010 805 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms