RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 LINC00597Q9H2U6 94 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 MAGIXQ9H6Y5 334 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 PCDH12Q9NPG4 1184 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 TIMMDC1Q9NPL8 285 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 HPS4Q9NQG7 708 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 TBC1D14Q9P2M4 693 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 PPT2Q9UMR5 302 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 TSPAN11A1L157 253 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 KRT87PA6NCN2 255 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 TTC34A8MYJ7 566 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 UPK3BL1B0FP48 263 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 UPK3BL2E5RIL1 263 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF701M0R085 212 aaPredicted RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 GNGT2O14610 69 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 WNT9AO14904 365 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 PER2O15055 1255 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 UGDHO60701 494 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 GSNP06396 782 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 GSTM1P09488 218 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 TIMP2P16035 220 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 IL1RNP18510 177 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 MAP4P27816 1152 aaKnown RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 PTPN6P29350 595 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 NNMTP40261 264 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 ETV3P41162 512 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 ERVFC1P60507 584 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 GSTM4Q03013 218 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF33BQ06732 778 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 ABHD18Q0P651 414 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 EPS8Q12929 822 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 MYBPC3Q14896 1274 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 LRRC26Q2I0M4 334 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 HENMT1Q5T8I9 393 aaKnown RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 NOXRED1Q6NXP6 359 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 KIAA0907Q7Z7F0 614 aaPredicted RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 GPR180Q86V85 440 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 ANKRD46Q86W74 232 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 CLVS1Q8IUQ0 354 aaPredicted RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 PNPT1Q8TCS8 783 aaKnown RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 FRS2Q8WU20 508 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 CYB5D2Q8WUJ1 264 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 MYLIPQ8WY64 445 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 AURKBQ96GD4 344 aaPredicted RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 REXO5Q96IC2 774 aaKnown RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 FCRL1Q96LA6 429 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 HHIPQ96QV1 700 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZSCAN5AQ9BUG6 496 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 RIOK2Q9BVS4 552 aaKnown RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 NFKBIL1Q9UBC1 381 aaPredicted RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 MAGED1Q9Y5V3 778 aaPredicted RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 IRAK3Q9Y616 596 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 TNRC18O15417 2968 aaPredicted RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 OR2AG2A6NM03 316 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 HIDE1A8MVS5 230 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 FADS2P1A8MWK0 482 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 RFXANKO14593 260 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 CLGNO14967 610 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 PSIP1O75475 530 aaKnown RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 RFPL2O75678 378 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 RECQL5O94762 991 aaPredicted RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 LRATO95237 230 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 SERPINA1P01009 418 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 RHOP08100 348 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 PRPS1L1P21108 318 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 XPAP23025 273 aaPredicted RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 TTKP33981 857 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 CDKN2CP42773 168 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 KIR3DL1P43629 444 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 HLCSP50747 726 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 IRF8Q02556 426 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 CSTF3Q12996 717 aaKnown RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF77Q15935 545 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 DPY19L1Q2PZI1 675 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF284Q2VY69 593 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF648Q5T619 568 aaPredicted RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 TTC23Q5W5X9 447 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 THOC6Q86W42 341 aaKnown RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 ADHFE1Q8IWW8 467 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 RAVER1Q8IY67 606 aaKnown RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 C10orf111Q8N326 155 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 NAT16Q8N8M0 369 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 NETO1Q8TDF5 533 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 BTN2A2Q8WVV5 523 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 NELL1Q92832 810 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 CLP1Q92989 425 aaKnown RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 PAWRQ96IZ0 340 aaKnown RBP8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 EGLN2Q96KS0 407 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 MRGPRX3Q96LB0 322 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 FAM83CQ9BQN1 747 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 OSBPL10Q9BXB5 764 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 USE1Q9NZ43 259 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 GPRC5BQ9NZH0 403 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 IL36AQ9UHA7 158 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 UTS2RQ9UKP6 389 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 CROCCQ5TZA2 2017 aa8.08□□□□□ -1.12
SND1-IT1-201ENST00000623342 PLXNA2O75051 1894 aa8.07□□□□□ -1.12
SND1-IT1-201ENST00000623342 A0A1B0GVG6 124 aa8.07□□□□□ -1.12
SND1-IT1-201ENST00000623342 SOBPA7XYQ1 873 aa8.07□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZBBXA8MT70 800 aa8.07□□□□□ -1.12
SND1-IT1-201ENST00000623342 ARHGEF33A8MVX0 844 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms