RNA–Protein interactions for RNA: ENST00000622963.3

SNHG5-213, Transcript of small nucleolar RNA host gene 5, human

TSL 5 BASIC

Gene SNHG5, Length 753 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-213	ENST00000622963	NXT1	Q9UKK6	140 aa	Known RBP	11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	NENF	Q9UMX5	172 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	TDRKH	Q9Y2W6	561 aa	Known RBP	11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	PRSS21	Q9Y6M0	314 aa		11.13	□□□□□ -0.63
SNHG5-213	ENST00000622963	IGHV1-45	A0A0A0MS14	117 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	NSG1	A0A0A6YYJ2	146 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963		A0A1W2PQ72	361 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	OR5H15	A6NDH6	313 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	FAM227A	F5H4B4	570 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	PPP1R12A	O14974	1030 aa	Predicted RBP	11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	CTSV	O60911	334 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	SLCO2B1	O94956	709 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	ZGLP1	P0C6A0	271 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	KLK2	P20151	261 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	NSG1	P42857	185 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	ZNF140	P52738	457 aa	Predicted RBP	11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	ARSF	P54793	590 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	CASP6	P55212	293 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	CACNG1	Q06432	222 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	FOXD4	Q12950	439 aa	Predicted RBP	11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	BRD3	Q15059	726 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	TFDP3	Q5H9I0	405 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	NLRP9	Q7RTR0	991 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	TAX1BP1	Q86VP1	789 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	SHISA5	Q8N114	240 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	ZNF567	Q8N184	647 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	AGAP11	Q8TF27	550 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	MAGED4	Q96JG8	741 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	GPR137	Q96N19	417 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	IL17F	Q96PD4	163 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	FCRL5	Q96RD9	977 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	COPS8	Q99627	209 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	APOL2	Q9BQE5	337 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	MENT	Q9BUN1	341 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	PACSIN1	Q9BY11	444 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	RNF32	Q9H0A6	362 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	SYNPO2L	Q9H987	977 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	OR6C2	Q9NZP2	312 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	ASF1A	Q9Y294	204 aa		11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	RPH3A	Q9Y2J0	694 aa	Predicted RBP	11.12	□□□□□ -0.63
SNHG5-213	ENST00000622963	FN1	P02751	2386 aa	Known RBP	11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	FITM1	A5D6W6	292 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	BMP10	O95393	424 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	PKLR	P30613	574 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	TYRO3	Q06418	890 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	RPA4	Q13156	261 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	PCOLCE	Q15113	449 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	TAF1A	Q15573	450 aa	Predicted RBP	11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	LONRF1	Q17RB8	773 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	FRMPD2B	Q6IN97	320 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	CNST	Q6PJW8	725 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	NEK10	Q6ZWH5	1172 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	NDUFAF7	Q7L592	441 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	RFX6	Q8HWS3	928 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	SIAH3	Q8IW03	269 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	MARVELD2	Q8N4S9	558 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	THAP3	Q8WTV1	239 aa	Predicted RBP	11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	MIEF2	Q96C03	454 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	SDCCAG3	Q96C92	435 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	C10orf90	Q96M02	699 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	GBP4	Q96PP9	640 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	BPIFA3	Q9BQP9	254 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	FICD	Q9BVA6	458 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	ENAM	Q9NRM1	1142 aa		11.11	□□□□□ -0.63
SNHG5-213	ENST00000622963	JMJD1C	Q15652	2540 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	NSD1	Q96L73	2696 aa	Predicted RBP	11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	IGLV3-12	A0A075B6K2	115 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	TRBV5-4	A0A0C4DH59	114 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	FAM221A	A4D161	298 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	TMEM200C	A6NKL6	621 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	ZNF487	B1APH4	448 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	NPIPA5	E9PKD4	350 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	FANCG	O15287	622 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	PIM1	P11309	404 aa	Predicted RBP	11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	CARS	P49589	748 aa	Known RBP	11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	VSX2	P58304	361 aa	Predicted RBP	11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	SNRPN	P63162	240 aa	Known RBP	11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	TFF3	Q07654	80 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	GRB7	Q14451	532 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	GRM7	Q14831	915 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	KIR2DS3	Q14952	304 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	ZNF766	Q5HY98	468 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	FCRLB	Q6BAA4	426 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	SNX20	Q7Z614	316 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	SERPINA9	Q86WD7	417 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	DOLPP1	Q86YN1	238 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	PIANP	Q8IYJ0	282 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	TBC1D21	Q8IYX1	336 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	OR5K2	Q8NHB8	316 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	SIGLEC12	Q96PQ1	595 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	MDFI	Q99750	246 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	TRIM51	Q9BSJ1	452 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	LIME1	Q9H400	295 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	C10orf88	Q9H8K7	445 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	GPAM	Q9HCL2	828 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	CCM2L	Q9NUG4	571 aa	Predicted RBP	11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	ZDHHC3	Q9NYG2	299 aa		11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.1	□□□□□ -0.63
SNHG5-213	ENST00000622963	NPIPA1	Q9UND3	350 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms