RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 KCNE1BA0A087WTH5 132 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 CCDC163A0A0D9SF12 145 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ATP6AP2A0A1C7CYW4 349 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 SLC28A1O00337 649 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 FFAR3O14843 346 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 SCAMP1O15126 338 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 GPR42O15529 346 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 RGS14O43566 566 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ATP6AP2O75787 350 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 WFS1O76024 890 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ERGP11308 486 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 MTHFD1P11586 935 aaKnown RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 JUPP14923 745 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 EZRP15311 586 aaKnown RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 NPPBP16860 134 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 HNF4AP41235 474 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ACTR1BP42025 376 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ATP4BP51164 291 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 BLKP51451 505 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ACTR1AP61163 376 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 TBPL1P62380 186 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 RACK1P63244 317 aaKnown RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ZNF33BQ06732 778 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ACTN3Q08043 901 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 KLF10Q13118 480 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 EIF2B5Q13144 721 aaKnown RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 TSTA3Q13630 321 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 FZD2Q14332 565 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 SQLEQ14534 574 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 CLCA4Q14CN2 919 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ABRAXAS2Q15018 415 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 CPSF6Q16630 551 aaKnown RBP eCLIP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 TCHHL1Q5QJ38 904 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 GRHL2Q6ISB3 625 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 OGFOD2Q6N063 350 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 SCIMPQ6UWF3 145 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 TRIM46Q7Z4K8 759 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 SLC22A18ASQ8N1D0 253 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 PPFIBP2Q8ND30 876 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 SMPDL3AQ92484 453 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 PPP3R2Q96LZ3 170 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 OR4K3Q96R72 315 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 RAB11FIP5Q9BXF6 653 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 GSDMCQ9BYG8 508 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 PCBD2Q9H0N5 130 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 TMEM168Q9H0V1 697 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 EHD1Q9H4M9 534 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ELOVL6Q9H5J4 265 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 SPATA6Q9NWH7 488 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 TBC1D29Q9UFV1 150 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ZNF490Q9ULM2 529 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 RRP15Q9Y3B9 282 aaKnown RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 PTGDR2Q9Y5Y4 395 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 COPG1Q9Y678 874 aaKnown RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 SERTM1A2A2V5 107 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ANKRD65E5RJM6 399 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 E7EQ34 232 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 PSMD12O00232 456 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 PEX11AO75192 247 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 DNAJC8O75937 253 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 PRR35P0CG20 571 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 THRAP10827 490 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 IDO1P14902 403 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 AK4P27144 223 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 PIK3R1P27986 724 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 CD38P28907 300 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 HTR6P50406 440 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 RAB28P51157 221 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 CORO7P57737 925 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 STX1BP61266 288 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ERVK-8P63133 956 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 DOC2AQ14183 400 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 E2F2Q14209 437 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 FASTKQ14296 549 aaKnown RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 NAA25Q14CX7 972 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 HERC3Q15034 1050 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ZRSR2Q15696 482 aaKnown RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 GSTA3Q16772 222 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 HIST2H2ACQ16777 129 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 SMU1Q2TAY7 513 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 ATP6AP1LQ52LC2 224 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 SGO1Q5FBB7 561 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 C6orf136Q5SQH8 315 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 PRAMEF14Q5SWL7 426 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 C10orf62Q5T681 223 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 THEMIS2Q5TEJ8 643 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 PRAMEF13Q5VWM6 474 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 FAM219BQ5XKK7 198 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 FRG2Q64ET8 278 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 CWF19L1Q69YN2 538 aaKnown RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 HIST2H2AA3Q6FI13 130 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 DUS1LQ6P1R4 473 aaKnown RBP6.77□□□□□ -1.33
CBWD3-219ENST00000622817 SLC30A9Q6PML9 568 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 LCTLQ6UWM7 567 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 SLCO4C1Q6ZQN7 724 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 PARGQ86W56 976 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 NRROSQ86YC3 692 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 DEFB119Q8N690 84 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 OR2T11Q8NH01 316 aa6.77□□□□□ -1.33
CBWD3-219ENST00000622817 CCL4L1Q8NHW4 92 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms