RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 EEF1AKMT1Q8WVE0 214 aa23.94■■□□□ 1.42
PMS1-220ENST00000618056 SLC39A7Q92504 469 aa23.94■■□□□ 1.42
PMS1-220ENST00000618056 GPR87Q9BY21 358 aa23.94■■□□□ 1.42
PMS1-220ENST00000618056 PCMTD2Q9NV79 361 aa23.94■■□□□ 1.42
PMS1-220ENST00000618056 NSMCE4AQ9NXX6 385 aa23.94■■□□□ 1.42
PMS1-220ENST00000618056 KLHL20Q9Y2M5 609 aa23.94■■□□□ 1.42
PMS1-220ENST00000618056 VWA7Q9Y334 891 aa23.94■■□□□ 1.42
PMS1-220ENST00000618056 AP1M2Q9Y6Q5 423 aa23.94■■□□□ 1.42
PMS1-220ENST00000618056 MEN1O00255 615 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 ZNF749O43361 778 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 SLC16A8O95907 504 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 GRIA3P42263 894 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 FCRL6Q6DN72 434 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 ZDHHC24Q6UX98 284 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 UBE2R2Q712K3 238 aaPredicted RBP23.93■■□□□ 1.42
PMS1-220ENST00000618056 CYS1Q717R9 158 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 PALM2Q8IXS6 379 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 GPATCH11Q8N954 259 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 ZNF480Q8WV37 535 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 SEC14L1Q92503 715 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 ZNF592Q92610 1267 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 CLIP3Q96DZ5 547 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 CATSPER2Q96P56 530 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 ENAMQ9NRM1 1142 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 EURLQ9NYK6 297 aa23.93■■□□□ 1.42
PMS1-220ENST00000618056 MRPS18BQ9Y676 258 aaKnown RBP23.93■■□□□ 1.42
PMS1-220ENST00000618056 NKX2-8O15522 239 aa23.92■■□□□ 1.42
PMS1-220ENST00000618056 RECKO95980 971 aa23.92■■□□□ 1.42
PMS1-220ENST00000618056 C8GP07360 202 aa23.92■■□□□ 1.42
PMS1-220ENST00000618056 PNLIPRP1P54315 467 aa23.92■■□□□ 1.42
PMS1-220ENST00000618056 CDC20Q12834 499 aa23.92■■□□□ 1.42
PMS1-220ENST00000618056 ILF2Q12905 390 aaKnown RBP23.92■■□□□ 1.42
PMS1-220ENST00000618056 SP140Q13342 867 aa23.92■■□□□ 1.42
PMS1-220ENST00000618056 NAA25Q14CX7 972 aa23.92■■□□□ 1.42
PMS1-220ENST00000618056 TRADDQ15628 312 aa23.92■■□□□ 1.42
PMS1-220ENST00000618056 TLDC1Q6P9B6 456 aa23.92■■□□□ 1.42
PMS1-220ENST00000618056 FAM199XQ6PEV8 388 aaPredicted RBP23.92■■□□□ 1.42
PMS1-220ENST00000618056 ZC3HC1Q86WB0 502 aaKnown RBP23.92■■□□□ 1.42
PMS1-220ENST00000618056 MIPEPQ99797 713 aa23.92■■□□□ 1.42
PMS1-220ENST00000618056 DPH2Q9BQC3 489 aaPredicted RBP23.92■■□□□ 1.42
PMS1-220ENST00000618056 MCMBPQ9BTE3 642 aa23.92■■□□□ 1.42
PMS1-220ENST00000618056 LRRC1Q9BTT6 524 aa23.92■■□□□ 1.42
PMS1-220ENST00000618056 E7ENX8 843 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 TSPAN12O95859 305 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 GSTA2P09210 222 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 SSTR1P30872 391 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 TAP2Q03519 686 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 PDAP1Q13442 181 aaKnown RBP23.91■■□□□ 1.42
PMS1-220ENST00000618056 TBR1Q16650 682 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 LINC00303Q3SY05 128 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 ZC3H12BQ5HYM0 836 aaKnown RBP23.91■■□□□ 1.42
PMS1-220ENST00000618056 RHBDD2Q6NTF9 364 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 STRA8Q7Z7C7 330 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 MYO1HQ8N1T3 1032 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 DLG3Q92796 817 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 EXTL1Q92935 676 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 MR1Q95460 341 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 LINGO1Q96FE5 620 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 OLFM1Q99784 485 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 SPRTNQ9H040 489 aaPredicted RBP23.91■■□□□ 1.42
PMS1-220ENST00000618056 BSNQ9UPA5 3926 aa23.91■■□□□ 1.42
PMS1-220ENST00000618056 SLC16A5O15375 505 aa23.9■■□□□ 1.42
PMS1-220ENST00000618056 ZSCAN9O15535 394 aaPredicted RBP23.9■■□□□ 1.42
PMS1-220ENST00000618056 CMPK1P30085 196 aa23.9■■□□□ 1.42
PMS1-220ENST00000618056 IL2P60568 153 aa23.9■■□□□ 1.42
PMS1-220ENST00000618056 MCATQ8IVS2 390 aaKnown RBP23.9■■□□□ 1.42
PMS1-220ENST00000618056 LRRC56Q8IYG6 542 aaPredicted RBP23.9■■□□□ 1.42
PMS1-220ENST00000618056 SYTL1Q8IYJ3 562 aa23.9■■□□□ 1.42
PMS1-220ENST00000618056 MCOLN3Q8TDD5 553 aa23.9■■□□□ 1.42
PMS1-220ENST00000618056 SLC7A5P2Q9GIP4 190 aa23.9■■□□□ 1.42
PMS1-220ENST00000618056 CHST8Q9H2A9 424 aa23.9■■□□□ 1.42
PMS1-220ENST00000618056 SRPK3Q9UPE1 567 aa23.9■■□□□ 1.42
PMS1-220ENST00000618056 KATNA1O75449 491 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 CREG1O75629 220 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 SYF2O95926 243 aaKnown RBP23.89■■□□□ 1.42
PMS1-220ENST00000618056 CTSBP07858 339 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 RPA3P35244 121 aaPredicted RBP23.89■■□□□ 1.42
PMS1-220ENST00000618056 RPS15P62841 145 aaKnown RBP23.89■■□□□ 1.42
PMS1-220ENST00000618056 SLC7A5Q01650 507 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 ZNF385CQ66K41 422 aaPredicted RBP23.89■■□□□ 1.42
PMS1-220ENST00000618056 SUSD1Q6UWL2 747 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 CAPN12Q6ZSI9 719 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 MMGT1Q8N4V1 131 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 MNS1Q8NEH6 495 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 ZNF285Q96NJ3 590 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 RHOJQ9H4E5 214 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 PARVBQ9HBI1 364 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 SMYD2Q9NRG4 433 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 ANKMY1Q9P2S6 941 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 ADAMTS6Q9UKP5 1117 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 PDE10AQ9Y233 779 aa23.89■■□□□ 1.42
PMS1-220ENST00000618056 TCRBV9S1A1TA0A576 114 aa23.88■■□□□ 1.41
PMS1-220ENST00000618056 RAB40ALP0C0E4 278 aa23.88■■□□□ 1.41
PMS1-220ENST00000618056 PTPN4P29074 926 aa23.88■■□□□ 1.41
PMS1-220ENST00000618056 IMPA1P29218 277 aa23.88■■□□□ 1.41
PMS1-220ENST00000618056 GCGRP47871 477 aa23.88■■□□□ 1.41
PMS1-220ENST00000618056 BORAQ6PGQ7 559 aa23.88■■□□□ 1.41
PMS1-220ENST00000618056 PROKR1Q8TCW9 393 aa23.88■■□□□ 1.41
PMS1-220ENST00000618056 CDKL2Q92772 493 aa23.88■■□□□ 1.41
PMS1-220ENST00000618056 PDLIM5Q96HC4 596 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms