RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 TPK1Q9H3S4 243 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ZBTB26Q9HCK0 441 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 LYARQ9NX58 379 aaKnown RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 TMEM9Q9P0T7 183 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 FCF1Q9Y324 198 aaKnown RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 SPIN1Q9Y657 262 aaPredicted RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 TMEM88BA6NKF7 163 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 HCN1O60741 890 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 RLN2P04090 185 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 PSKH1P11801 424 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 DGKGP49619 791 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 SEPHS1P49903 392 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 OR2T5Q6IEZ7 315 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 KLHDC10Q6PID8 442 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 LINGO4Q6UY18 593 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 OR2T29Q8NH02 315 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 HERVK_113Q902F9 699 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 RDH12Q96NR8 316 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ITPAQ9BY32 194 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 SLC32A1Q9H598 525 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 NMUR1Q9HB89 426 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ZDHHC18Q9NUE0 388 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 FAM120CQ9NX05 1096 aaKnown RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 MKS1Q9NXB0 559 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ELOVL2Q9NXB9 296 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 CROCCQ5TZA2 2017 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 UNCXA6NJT0 531 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 RCBTB2O95199 551 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 PIM1P11309 404 aaPredicted RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 IGFBP4P22692 258 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 DCKP27707 260 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 FMO3P31513 532 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 CASRP41180 1078 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 MAP3K8P41279 467 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 MLLT3P42568 568 aaPredicted RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 PCDH1Q08174 1060 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ENPP2Q13822 863 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 RNASE12Q5GAN4 147 aaKnown RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 SIRPB2Q5JXA9 342 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 PRAMEF14Q5SWL7 426 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 PRAMEF13Q5VWM6 474 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ANO7Q6IWH7 933 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 C12orf42Q96LP6 360 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 DGAT2Q96PD7 388 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TM9SF3Q9HD45 589 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TAS2R1Q9NYW7 299 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 MKL2Q9ULH7 1088 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TMEM5Q9Y2B1 443 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 Q9Y3F1 56 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 GPR25O00155 361 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 ACOX3O15254 700 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 CPNE3O75131 537 aaKnown RBP4.46□□□□□ -1.69
CHD9-221ENST00000615216 SNX4O95219 450 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 KAT7O95251 611 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 VNN1O95497 513 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 H1F0P07305 194 aaKnown RBP4.46□□□□□ -1.69
CHD9-221ENST00000615216 EPCAMP16422 314 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 FLT3LGP49771 235 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 MTPNP58546 118 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 ZNF460Q14592 562 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 TCEAL1Q15170 157 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 ZNF783Q6ZMS7 281 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 CAND1Q86VP6 1230 aaKnown RBP4.46□□□□□ -1.69
CHD9-221ENST00000615216 SPAG16Q8N0X2 631 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 OR8H3Q8N146 312 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 CHCHD4Q8N4Q1 142 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 OR7D4Q8NG98 312 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 OVCA2Q8WZ82 227 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 CREB3L1Q96BA8 519 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 SUSD3Q96L08 255 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 BCO2Q9BYV7 579 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 SERINC1Q9NRX5 453 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 ZNF224Q9NZL3 707 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 CD84Q9UIB8 345 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 FZD1Q9UP38 647 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 TELO2Q9Y4R8 837 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 SHROOM3Q8TF72 1996 aa4.46□□□□□ -1.69
CHD9-221ENST00000615216 RNF225M0QZC1 329 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 DNM1LO00429 736 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 RAB36O95755 333 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 C7P10643 843 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 MYCLP1P12525 358 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 VIPR1P32241 457 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 TAS2R50P59544 299 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 TXNL4AP83876 142 aaKnown RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 ZNF234Q14588 700 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 DEFB115Q30KQ5 88 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 EML3Q32P44 896 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 HSDL1Q3SXM5 330 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 EIF5AL1Q6IS14 154 aaKnown RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 XKRXQ6PP77 449 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 IQCF2Q8IXL9 164 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CCDC54Q8NEL0 328 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 GPR151Q8TDV0 419 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 AKAP1Q92667 903 aaKnown RBP eCLIP4.46□□□□□ -1.7
CHD9-221ENST00000615216 CCDC115Q96NT0 180 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 NDC1Q9BTX1 674 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 FZD8Q9H461 694 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ACTR3BQ9P1U1 418 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ZNF670-ZNF695F2Z2N8 137 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms