RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 EML4Q9HC35 981 aaKnown RBP11.09□□□□□ -0.63
SLIRP-212ENST00000613856 DNAJC28Q9NX36 388 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 STOX2Q9P2F5 926 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-212ENST00000613856 TBC1D29Q9UFV1 150 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 POLG2Q9UHN1 485 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 PSMD13Q9UNM6 376 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 RAP2CQ9Y3L5 183 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 PCDHGB2Q9Y5G2 931 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 PCM1Q15154 2024 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 LRRC14BA6NHZ5 514 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 K7EPI3 171 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 SCAMP1O15126 338 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 TNFSF14O43557 240 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 LYPLA1O75608 230 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-212ENST00000613856 STK16O75716 305 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 MLYCDO95822 493 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 CTSEP14091 401 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 SLC2A4P14672 509 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 IMPA1P29218 277 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 CTSKP43235 329 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 HSPA7P48741 367 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 HNRNPKP61978 463 aaKnown RBP eCLIP11.08□□□□□ -0.64
SLIRP-212ENST00000613856 CLCQ05315 142 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 LCP2Q13094 533 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 CLCA4Q14CN2 919 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 ELOCQ15369 112 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 RPE65Q16518 533 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 CCSMST1Q4G0I0 132 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 ARL13AQ5H913 290 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-212ENST00000613856 SLC30A9Q6PML9 568 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 ATG14Q6ZNE5 492 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 OR56A3Q8NH54 315 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 CCT8L2Q96SF2 557 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 ZNF382Q96SR6 550 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 SIKE1Q9BRV8 207 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 RAB11FIP5Q9BXF6 653 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 PRDM8Q9NQV8 689 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 SCHIP1Q9P0W5 487 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-212ENST00000613856 TAAR2Q9P1P5 351 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 OPTCQ9UBM4 332 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 SPASTQ9UBP0 616 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 ASB1Q9Y576 335 aa11.08□□□□□ -0.64
SLIRP-212ENST00000613856 KIR2DS5A0A0G2JLQ3 304 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 A0A0G2JNG1 304 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 OR5K4A6NMS3 321 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 ZNF839A8K0R7 811 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 KIR2DS3K7RE56 304 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 RRP9O43818 475 aaKnown RBP11.07□□□□□ -0.64
SLIRP-212ENST00000613856 KDM1AO60341 852 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 EML2O95834 649 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 SLC16A8O95907 504 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 CHRNGP07510 517 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 TROVE2P10155 538 aaKnown RBP eCLIP11.07□□□□□ -0.64
SLIRP-212ENST00000613856 CCND1P24385 295 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 PKNOX1P55347 436 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 GTF2H2Q13888 395 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 KIR2DS5Q14953 304 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 CYP2A13Q16696 494 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 ZXDCQ2QGD7 858 aaPredicted RBP11.07□□□□□ -0.64
SLIRP-212ENST00000613856 C18orf21Q32NC0 220 aaPredicted RBP11.07□□□□□ -0.64
SLIRP-212ENST00000613856 PTCHD3Q3KNS1 767 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 ZNF542PQ5EBM4 170 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 PRRT3Q5FWE3 981 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 CGB2Q6NT52 195 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 GTF2H2CQ6P1K8 395 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 DUS1LQ6P1R4 473 aaKnown RBP11.07□□□□□ -0.64
SLIRP-212ENST00000613856 AGTRAPQ6RW13 159 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 GOLGA7Q7Z5G4 137 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 CPLX4Q7Z7G2 160 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 CUZD1Q86UP6 607 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 HOMEZQ8IX15 550 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 LRRC56Q8IYG6 542 aaPredicted RBP11.07□□□□□ -0.64
SLIRP-212ENST00000613856 RAB42Q8N4Z0 105 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 ZNF548Q8NEK5 533 aaPredicted RBP11.07□□□□□ -0.64
SLIRP-212ENST00000613856 HMGCLL1Q8TB92 370 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 PIWIL2Q8TC59 973 aaKnown RBP11.07□□□□□ -0.64
SLIRP-212ENST00000613856 AGAP11Q8TF27 550 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 ZNF480Q8WV37 535 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 ZFPM2Q8WW38 1151 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 NSUN5Q96P11 429 aaKnown RBP11.07□□□□□ -0.64
SLIRP-212ENST00000613856 HGH1Q9BTY7 390 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 MENTQ9BUN1 341 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 ILKAPQ9H0C8 392 aaPredicted RBP11.07□□□□□ -0.64
SLIRP-212ENST00000613856 KIR3DX1Q9H7L2 352 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 ZNF395Q9H8N7 513 aaPredicted RBP11.07□□□□□ -0.64
SLIRP-212ENST00000613856 ZBTB26Q9HCK0 441 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 POT1Q9NUX5 634 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 IMP3Q9NV31 184 aaKnown RBP11.07□□□□□ -0.64
SLIRP-212ENST00000613856 COLEC10Q9Y6Z7 277 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 HECTD1Q9ULT8 2610 aa11.07□□□□□ -0.64
SLIRP-212ENST00000613856 ARID1BQ8NFD5 2236 aaPredicted RBP11.07□□□□□ -0.64
SLIRP-212ENST00000613856 COL6A6A6NMZ7 2263 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 KRT87PA6NCN2 255 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 OR52A4PA6NMU1 304 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 SLCO1B7G3V0H7 640 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 J3QKU1 62 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 UBFD1O14562 309 aaKnown RBP11.06□□□□□ -0.64
SLIRP-212ENST00000613856 SNX3O60493 162 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 CCNT2O60583 730 aaKnown RBP11.06□□□□□ -0.64
SLIRP-212ENST00000613856 KATNA1O75449 491 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms