RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ETV5P41161 510 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 SF3A2Q15428 464 aaKnown RBP8.59□□□□□ -1.03
TTC28-208ENST00000612946 SLC36A4Q6YBV0 504 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 SLC15A4Q8N697 577 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 OR4M2Q8NGB6 313 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 ARPC5LQ9BPX5 153 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 MIOSQ9NXC5 875 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 STK16O75716 305 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 CD47Q08722 323 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 PEA15Q15121 130 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 TCEAL1Q15170 157 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 ERFEQ4G0M1 354 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 ESX1Q8N693 406 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 OR4L1Q8NH43 312 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 C11orf16Q9NQ32 467 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 RHOCP08134 193 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 SAGP10523 405 aaPredicted RBP8.59□□□□□ -1.03
TTC28-208ENST00000612946 HK1P19367 917 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 LPOP22079 712 aaPredicted RBP8.59□□□□□ -1.03
TTC28-208ENST00000612946 CDKN2BP42772 138 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 WDR4P57081 412 aaKnown RBP8.59□□□□□ -1.03
TTC28-208ENST00000612946 KLHL26Q53HC5 615 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 ARMC12Q5T9G4 340 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 BEST3Q8N1M1 668 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.59□□□□□ -1.03
TTC28-208ENST00000612946 SLC44A5Q8NCS7 719 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 GLTPQ9NZD2 209 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 ABCC6O95255 1503 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 ANKRD33BA6NCL7 494 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 PTBP1P26599 531 aaKnown RBP eCLIP8.59□□□□□ -1.031e-6■■■■□ 19.3
TTC28-208ENST00000612946 GSTM4Q03013 218 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 FAM171BQ6P995 826 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 DDX53Q86TM3 631 aaKnown RBP8.59□□□□□ -1.03
TTC28-208ENST00000612946 SDCBP2Q9H190 292 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 VRTNQ9H8Y1 702 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 MGAT4CQ9UBM8 478 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 ANKRD36CQ5JPF3 1778 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 H0YGN5 161 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 MMP8P22894 467 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 CAP2P40123 477 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 NR4A2P43354 598 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 GAS6Q14393 721 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 MGAT5BQ3V5L5 792 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 C6orf141Q5SZD1 244 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 GPR153Q6NV75 609 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 PCBD2Q9H0N5 130 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 TMEM134Q9H6X4 195 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 SIRPGQ9P1W8 387 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 TMX2Q9Y320 296 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 NFS1Q9Y697 457 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 DUOX1Q9NRD9 1551 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 H3BUI4 141 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 TGOLN2O43493 480 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 OAS1P00973 400 aaKnown RBP8.59□□□□□ -1.03
TTC28-208ENST00000612946 URODP06132 367 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 HOXD10P28358 340 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 CLCN4P51793 760 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 GHDCQ8N2G8 530 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 OR10R2Q8NGX6 335 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 FBXO32Q969P5 355 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 FKBP10Q96AY3 582 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 PTERQ96BW5 349 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 ZNF419Q96HQ0 510 aaPredicted RBP8.59□□□□□ -1.03
TTC28-208ENST00000612946 RIPOR3Q96MK2 946 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 IFT22Q9H7X7 185 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 FAM230AA0A1W2PPH8 454 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 FAM149AA5PLN7 773 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 PRKXP51817 358 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 PLEKHA1Q9HB21 404 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 CHATP28329 748 aa8.59□□□□□ -1.04
TTC28-208ENST00000612946 CLK2P49760 499 aaKnown RBP8.59□□□□□ -1.04
TTC28-208ENST00000612946 TBX4P57082 545 aa8.59□□□□□ -1.04
TTC28-208ENST00000612946 FSTL4Q6MZW2 842 aa8.59□□□□□ -1.04
TTC28-208ENST00000612946 CORO6Q6QEF8 472 aa8.59□□□□□ -1.04
TTC28-208ENST00000612946 GTPBP8Q8N3Z3 284 aaPredicted RBP8.59□□□□□ -1.04
TTC28-208ENST00000612946 SEMA6DQ8NFY4 1073 aa8.59□□□□□ -1.04
TTC28-208ENST00000612946 YIPF4Q9BSR8 244 aa8.59□□□□□ -1.04
TTC28-208ENST00000612946 FNIP2Q9P278 1114 aa8.59□□□□□ -1.04
TTC28-208ENST00000612946 ZNF780BQ9Y6R6 833 aa8.59□□□□□ -1.04
TTC28-208ENST00000612946 H3BMQ9 156 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 GKP32189 559 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 MXD1Q05195 221 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 TSTQ16762 297 aaKnown RBP8.58□□□□□ -1.04
TTC28-208ENST00000612946 Q6ZNX1 250 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 DSG4Q86SJ6 1040 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 COG8Q96MW5 612 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 NAALAD2Q9Y3Q0 740 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 F8VP50 259 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 RXRBP28702 533 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 TKTL1P51854 596 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 CACNB3P54284 484 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 PEX6Q13608 980 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 ZNF34Q8IZ26 560 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 CPT1BQ92523 772 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 LIN37Q96GY3 246 aaPredicted RBP8.58□□□□□ -1.04
TTC28-208ENST00000612946 TUBP50607 506 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 XKR6Q5GH73 641 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 SLX4IPQ5VYV7 408 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 UGT2A3Q6UWM9 527 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 CHSY3Q70JA7 882 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms